Acetivibrio clariflavus: Clocl_3940
Help
Entry
Clocl_3940 CDS
T01661
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03420
Nucleotide excision repair
ccl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Clocl_3940
03430 Mismatch repair
Clocl_3940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_3940
Enzymes [BR:
ccl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clocl_3940
DNA repair and recombination proteins [BR:
ccl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clocl_3940
MMR (mismatch excision repair)
Other MMR factors
Clocl_3940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
CarD_TRCF_RID
ResIII
AAA_14
Sgo0707_N2
AAA_22
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AEV70380
UniProt:
G8M360
LinkDB
All DBs
Position
complement(4559905..4562124)
Genome browser
AA seq
739 aa
AA seq
DB search
MDLLKGLNEEQKKAVLHGEGPLLILAGAGSGKTRVLTNRIAYLIREKGVHPSNILAITFT
NKAAREMKERIDNLVGDVSDNIWVSTFHSMCLRILRRDIEKIDYDRSFVIFDYADQQTLI
KDCLKELNLNEKNYVPKSVLEMIGRAKDELIDPDTYSKIYVSDFRMANIAKIYGLYQKKL
KQNNALDFDDIIMLTIKLFSNHPDVLEYYQKKFKYILVDEYQDTNTAQYSLVSMLSQKSR
NLCVVGDDDQSIYGWRGANIRNILDFEKEFRDCKIIKLEQNYRSTQTILDAANSVIKNNF
GRKSKKLWTENKGGDKIKHCLCANEHEEAYFVASEIKRLSTVRNMQYKDFAILYRINAMS
RVLEEMLMKEGIPYKIFGGLKFYDRKEIKDLLAYLRLIQNPSDNVSLKRCINEPKRGIGA
ATIDTAERIANSRGVSIFSIISSASEIPELARSASKLEGFVAMIARLRVLKDVMRVPELI
QEVLEQSGILKSYEQEGTIEAQTRIENIKELISVAVEFEQKDGEQSLEDFLANVSLVADV
DNMDENSDHVVLMTLHSAKGLEFPVVFMVGMEEGIFPGYRSMTDESELEEERRLCYVGIT
RAKQNLYMTNTFTRTLFGNTTYNKMSRFLKEIPPELIESNEREEPEDSRDVINKSKGIYG
TKSFGDSYSYRTASFTDTGVPKTAATDFSVGDQVEHKKFGVGIITKIEKEKDDFMLEIHF
KGTGMKRLMASFARLSKIG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggatttattaaaaggacttaacgaggaacagaagaaggcagtattacatggggagggt
ccccttcttatattggcaggtgcaggaagcgggaagaccagggttcttacgaataggatt
gcttatctgattcgtgagaaaggagttcatccatcaaatatattggctataacctttacc
aataaagcagccagggaaatgaaggaaaggattgataatttagtaggggatgtaagtgat
aatatctgggtaagcacttttcactctatgtgtttaagaatattgagaagggatattgaa
aagattgattatgaccgcagttttgtgatctttgattacgcagaccagcagacgcttatt
aaggattgtttgaaggaattaaatttaaatgaaaagaattatgttccaaaatcggtactg
gagatgataggacgggcaaaggatgaacttattgatccggatacctattccaagatctat
gtttcagattttaggatggccaatatagctaaaatatatgggctgtaccaaaaaaagtta
aagcagaacaatgctttggattttgacgacataatcatgctgaccattaagcttttttcc
aatcatcctgatgttttggaatactatcagaaaaaatttaaatatatacttgttgatgag
tatcaagataccaacacagcccagtattcactggtaagcatgctttcacaaaaaagcagg
aatttatgcgtagtgggcgacgatgatcaatccatttatggatggagaggtgccaatatt
cgcaatattttagattttgaaaaggaattcagagactgtaaaattattaaacttgaacag
aattacagatctactcaaaccatccttgatgctgcaaacagtgtaattaaaaataatttt
ggaagaaaaagcaagaagctttggactgagaacaaaggcggagacaagataaaacattgc
ctgtgtgctaatgaacatgaagaggcatatttcgttgccagtgaaataaagaggctttct
acagtaaggaacatgcaatacaaggattttgcaatattatacagaataaatgcaatgtcc
cgtgtattggaagaaatgctcatgaaagagggaattccctataaaattttcggaggctta
aagttctatgaccgaaaggaaattaaggatcttttggcatacctccgtctaattcagaac
ccttctgacaacgtaagtcttaaaagatgtataaacgagcctaagagaggtataggtgcg
gctactatagatacagcagaaagaattgccaacagtaggggagtaagtattttctccatt
atatcttcagcctcggaaatacctgagttggcaagaagtgcttcaaaacttgaaggtttt
gtggctatgatagcaaggctgcgtgtgttaaaggatgttatgagagtaccggagttgata
caggaagttttagaacagtcgggcatactaaagagttatgaacaggaaggtaccattgaa
gcacaaacgagaatcgaaaatataaaagaattgatttcagtggctgtggaatttgagcaa
aaggatggcgagcaaagtcttgaagattttcttgccaatgtatcccttgttgcagatgtt
gataatatggatgagaacagcgaccatgtcgtgcttatgaccttgcacagtgcaaaaggg
cttgagttccctgttgtattcatggtaggaatggaagaaggcatctttccgggttacaga
tcaatgactgatgaaagtgaactggaggaagagcgcaggctgtgttatgtcggtattacc
agggcaaaacaaaacctttatatgacaaatacatttaccaggacgttgttcggtaatact
acctataataaaatgtcgaggttcttgaaggaaataccccctgaattgattgaaagcaac
gaaagggaagagccggaggattcaagagatgttataaataaaagtaaaggtatttacggt
acaaagagttttggtgattcttacagctatagaactgcttcatttaccgataccggtgtg
cctaaaacagcagctacagatttcagtgtgggagaccaggtagagcacaagaagtttggt
gtgggaataataacgaaaattgagaaggaaaaagatgattttatgctggagatacacttt
aaaggtaccggaatgaaacgattgatggcttcctttgcaaggttgtccaaaataggatag
DBGET
integrated database retrieval system
