Acetivibrio clariflavus: Clocl_3983
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Entry
Clocl_3983 CDS
T01661
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Clocl_3983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_3983
Enzymes [BR:
ccl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Clocl_3983
DNA repair and recombination proteins [BR:
ccl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Clocl_3983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AEV70419
UniProt:
G8M399
LinkDB
All DBs
Position
complement(4618453..4619379)
Genome browser
AA seq
308 aa
AA seq
DB search
MKIVINDNMEYGDDMEYKGYKISQEENSIIVENIKDFNAVHTFECGQCFRWIRQEDGSYT
GVAKGKVINVSIDDGVLVLKNTNLEDFKNIWFDYFDLGRDYGQVKEAVMKDDIMQKAIDF
GWGIRLLKQDIWETLISFIISANNRIPRIMKTVEIIARLYGDELMMDGNKYYSFPDVNKL
AQSNVEELEVCKGGFRCKYILNSSQMVSVGQVDLKQLSQMDTDSAREELMKFPGVGPKVA
DCVLLYSGTKYDVFPTDVWVRRVMGELYFKREAGFGEIQKFAREYFGDLAGFAQQYLFYY
ARENKIGT
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtaataaatgataatatggaatacggtgatgatatggagtacaagggatat
aaaataagtcaggaagaaaacagcattattgtagaaaatataaaagactttaatgctgta
catacttttgagtgcgggcagtgctttcgatggattaggcaggaagatgggagctataca
ggggttgcaaagggaaaagtaattaatgtaagtattgatgatggtgtacttgtgttgaag
aacaccaatttggaagattttaaaaatatatggtttgactactttgatttgggaagggat
tatggtcaagtcaaagaagctgtgatgaaagacgatattatgcagaaagccattgatttt
ggctggggtatacggcttttaaaacaggatatttgggaaactttaatatctttcattatt
tcggccaataacagaattcccagaataatgaagacagttgagataattgcgagattatat
ggagatgaattaatgatggatgggaataaatattactcttttcccgatgtaaataagctt
gcacagtctaacgtagaagagctggaagtttgtaagggcggatttagatgcaagtatatc
ctgaattcttcccaaatggtaagcgtaggacaagttgaccttaagcagttatctcaaatg
gataccgacagtgcaagggaagaacttatgaaatttcctggtgtgggacctaaggttgct
gactgtgttttgctttacagcggtacaaaatatgacgtttttccgacagatgtatgggta
aggagagtaatgggagaactttattttaaaagagaggcaggttttggtgagattcagaag
tttgcgagagagtattttggagatttggcaggttttgcacagcagtatcttttttactat
gcaagggaaaacaagataggcacttag
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