Acetivibrio clariflavus: Clocl_4009
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Entry
Clocl_4009 CDS
T01661
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
ccl
Acetivibrio clariflavus
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccl03021
]
Clocl_4009
Transcription machinery [BR:
ccl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Clocl_4009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
DYH2-5-8_CC
Motif
Other DBs
NCBI-ProteinID:
AEV70445
UniProt:
G8LST2
LinkDB
All DBs
Position
complement(4647108..4647872)
Genome browser
AA seq
254 aa
AA seq
DB search
MKVNLSKFGMNRLSDKPSNDEFISTLRLIKEGDNLLREEFLAKYTPFILKIASNFTGKYI
DVNNSDEYSIVLSAFNEAIDCYDLTKNYNFLLFSEHVIKKRLIDHMRKDKGNKEIPFSYF
EDETEFLEKYVSSVHDKSFEDIEQIDEIIEYKETLREFGISLEDLILNVPKHKDSRELCL
KIASILANDEELFRQLYKYKNIPRNDLKRRAGVHGRTIGRHRKYIIAVCLILKSNLEISK
SYLSIAEKGGKRGE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggtaaatctctcaaaatttggcatgaacagattaagcgataagccttctaatgat
gaattcatttctacgcttagacttataaaagaaggcgataaccttttaagagaagagttt
ttagcgaagtatactcctttcatattgaaaattgcatcgaattttaccggaaagtatatt
gatgtaaacaatagcgatgaatacagtattgtattatctgctttcaatgaagcaatagat
tgctatgacttgacaaaaaactataactttctgctgtttagtgaacatgttataaaaaaa
cgtttgatcgaccatatgagaaaggacaaaggaaacaaagagattcccttttcatatttt
gaagatgaaactgagttccttgaaaagtatgtaagttctgttcatgataagagctttgaa
gatattgagcagatagatgaaatcattgaatataaggaaacattaagagagtttggaata
agtttggaggatttgattttaaacgtacccaaacacaaagattcaagggaattatgcctt
aaaatagcttcaattcttgccaatgatgaggaattgttcagacaattgtataaatacaaa
aatattccaagaaatgaccttaagagaagagccggtgttcatggaagaactataggaagg
catagaaagtatataatcgcagtgtgtctgattttaaagagcaaccttgaaatttcaaag
agttatttaagtattgccgagaagggagggaaaaggggtgaataa
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