Corticium candelabrum: 134176524
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Entry
134176524 CDS
T11492
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
cclm Corticium candelabrum
Pathway
cclm04382
Cornified envelope formation
cclm04512
ECM-receptor interaction
cclm04518
Integrin signaling
cclm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134176524
04518 Integrin signaling
134176524
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134176524
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134176524
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclm04147
]
134176524
00536 Glycosaminoglycan binding proteins [BR:
cclm00536
]
134176524
Exosome [BR:
cclm04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
134176524
Glycosaminoglycan binding proteins [BR:
cclm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134176524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
134176524
NCBI-ProteinID:
XP_062499175
LinkDB
All DBs
Position
2:10017246..10038754
Genome browser
AA seq
1566 aa
AA seq
DB search
MLPKWTPLVLLNKFYLENYPLKGHAMVLKRDGEMQCQMTGKTWMCSRQIGPPSLKGEDGE
PGKKGDKGESGPQGEQGPKGEVGLDGPPGPDGKEGNKGDPGEQGIKGEKGSLGNDGGKGD
KGEPGVKGETGVGIQGQPGEPGINAISEKGEPGPQGPKGEPGTLINGSKGEPGQPGERGP
PGQKGAQGTKGDDGEICEDGFPGEKGDKGGQGDDGEKGEKGFEGSDGPQGPIGPKGEPGV
PGDRGPEGLPGFANESKGDKGDKGEPGIDGFFGFDGLPGDKGDKGVPGSDAIAVIGSKGD
RGPKGEPGQKGTDGNDGTPGLQGEPGPKGEIGLCNECSPGDDGPQGVRGVKGDKGQPGEK
GDVGPEGPEGVNGTAIKGEKGQRGQRGFRGLKGESGIPGRDGPPGNVQMPPMDETTLEPP
TDSGDVGSVVRALIGPKGEPGLDGSNGTKGEKGDPGEKGNTGPKGDVGAEGDFGPQGMKG
EPGNGIMMKGDPGPMGPVGPPGEPGVNGTEGAKGDLGPVGAIGEKGSPGPPGNMGPQGLR
GPPGLKGSPGPMGPEGEIGFDGLPGPKGEPGDTGSPGSQGVNGTKGEEGVGMPGLDGAPG
DVGDKGDKGEAGPSGPKGDIGAPGERGPQGVQGNVGEKGDVGEQGEKGENGADGLPGFDG
LPGLRGGKGEPGLTGREGDDGAKGEKGERGSRGFKGDTGDEGPPGPLPPPAEKGDKGSPG
ETGIMGNPGNDGLDGQPGQPGGEGPRGAKGDKGNEGRIGEKGNKGELGPKGGQGSPGFDG
LPGNKGSKGGTGDPGPAGPQGNPGDDGPKGDEGGRGEKGDKGAVGEQGIDGPTGPDGPPG
PPGDAGPPGPKGSRGNRGFKGSKGNTGEKGEKGESQDGPEGPPGNKGERGPSGSSIRGVK
GDKGEQGSKGSDGLKGNEGEIGPPGGIGDIGMKGEIGPQGQRGPKGNKGNMGLIGIQGVK
GDTGDKGDEGSPGRDGEMGFTGMKGELGLTGGKGDEGGVGEPGVRGFKGDKGVMGDMGEK
GDMGLMGGKGAKGDEGPPGGRGPKGNRGSKGDKGNKGTIGIKGIDGPEGPKGNNGSKGDQ
GPDGPPGRRGMKGDKGVMGNIGEKGIKGDIGLPGGRGEPGRDGNDGLKGERGEKGLKGDM
GAKGDKGMTGPKGDRGEDGVDGEMGPKGNEGDKGMKGESGLQGPPGPSGRNGSRGDKGEP
GDKGTRGRKGDTGKEGVKGSRGPEGAKGVDGGDGPPGQQGLPGMDGGRGEKGDKGNDGAN
GTKGENGEVGLKGNRGTMGDKGQRGRKGDEGDEGDEGQNGDRGPKGEPGNIGDGGMKGDQ
GLKGSDGPKGNPGSSRAGWLLTRHSQTARLPECPENYTRLYYGYSFLQSHGNGYGRAQDL
GKPGSCLKFFNTMPYMHCSSSDTCHIAGGSDSSYWLTTDAPMPMSNVKNSDIDRYISRCV
VCEGASRVLAVHAQTGSTPDCPSGWGSLWDGYSYVAQTNNGAEGGGQSLSSAGSCLENFR
IVPFIECLSRGECRYSPPGLSFWLTTIDTVDQFRQPNDETLKGPIDSIRRVSRCRVCYRH
SSTLGF
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccaaatggactccactcgttctcctaaacaaattctatttggagaactaccct
ctgaaaggacatgctatggtgctaaaaagagatggagagatgcagtgtcaaatgactgga
aaaacatggatgtgttcgaggcaaattggtccaccctcgctcaagggagaggacggcgaa
ccaggcaagaaaggagacaaaggcgagtcaggaccacaaggagagcaaggccccaaagga
gaagtcggactcgatggtcctccagggccagatggcaaggaaggaaataaaggagatcct
ggagagcaaggaataaagggcgagaaaggcagtttgggaaacgatggcggtaagggagat
aagggagagcctggagtgaaaggagaaactggtgttggtatccaagggcaaccgggtgaa
cccggtatcaatgctattagcgagaaaggagagcctggacctcaaggaccaaaaggagag
cccggaacattaataaacggatccaaaggcgaaccaggacagccaggtgaacgcggacca
cccggacaaaaaggcgcacaaggaacaaaaggggatgacggcgaaatatgtgaagatgga
tttccaggagagaaaggagacaagggaggtcaaggcgacgacggtgaaaaaggcgagaag
ggattcgaaggttcggatggtccacagggacccataggtcctaaaggagaaccaggagta
ccaggggatcgggggccggagggtctgcccggttttgcaaatgaatcgaaaggagacaag
ggcgataaaggagagcctggaattgatggcttttttggatttgatggattaccgggtgac
aagggggataaaggagttccaggttctgacgcaatagctgtgattggatcgaaaggagat
agaggtccaaagggagagcctgggcagaaagggacagatggtaatgatggtacacctgga
ctacaaggagagcctggtcctaaaggtgaaataggtctttgcaatgaatgttcgccaggc
gatgatggaccacaaggagtgcgtggagtaaagggagataaggggcaaccaggagagaaa
ggtgatgttggaccagagggaccagagggggtgaatgggacagctattaaaggagagaag
ggtcaacgaggacaacgtggttttagagggcttaaaggtgaatcaggaattcctggtcgt
gatggtccacctggaaatgtacaaatgcctccaatggatgaaacgactcttgagcctccg
acagatagtggtgatgttggtagtgttgttcgtgctttgatcggtcctaagggagagcct
ggattggatggttcgaacggcacgaaaggagagaaaggcgatccaggagagaagggaaat
acgggtcctaagggtgatgttggtgcagaaggtgattttggtcctcaaggcatgaagggt
gagccaggaaacggaattatgatgaaaggagatccaggacctatgggtccggtcggacca
ccaggagaacccggagtaaatggaacggaaggagccaaaggtgatcttggccctgtcggt
gcaatcggtgagaaaggcagtccaggaccaccaggcaacatgggaccacaaggtctacgg
ggtccacctggactgaaaggatccccagggccaatgggaccggaaggtgaaataggattt
gacggattgccaggaccgaaaggagagccgggagacacgggtagccctggttcgcagggt
gtaaacggtacgaagggagaagaaggagtaggaatgccggggttggatggagctccagga
gatgttggagataaaggagacaaaggtgaagctggaccttctggaccgaagggtgacatt
ggtgcccctggtgaacgaggaccacaaggtgtgcaagggaatgttggtgagaaaggggat
gtgggagaacaaggagaaaagggtgaaaacggtgcagatggactccctgggtttgatggt
ctgcctggacttagaggaggtaagggcgagccgggactgacaggaagggaaggtgatgac
ggagctaagggagagaagggagagcgtggcagccgaggatttaaaggagacacgggcgat
gaaggacctcctgggccactacctccaccagctgaaaaaggtgacaaaggatctcctggt
gaaactggcattatgggtaacccaggaaatgatggacttgatggtcagcctggtcagcca
ggaggagaaggccctcgtggagcaaagggtgacaaaggtaacgaaggaaggataggtgaa
aagggtaacaagggagagcttggtccaaagggaggtcagggctctcctgggtttgacggg
ttgccaggcaataaaggcagtaaaggtggcacgggtgatcctggtccagctggacctcaa
ggcaatccaggagatgacggacctaaaggtgatgagggtggacgaggagagaaaggagat
aaaggagcagttggagagcaaggaattgatggtccaacaggtccagatggtccaccggga
cctccaggggatgcgggtccaccaggaccaaaaggatcgcgaggaaatcgaggttttaaa
ggctcaaaaggaaacacaggagagaagggagagaagggagagagccaagatggacctgaa
ggaccaccaggcaataagggtgagcgtggcccaagcggatcatccatacgaggtgtgaaa
ggcgacaaaggtgaacaaggatcaaaaggaagcgacggactgaaaggaaatgaaggagaa
ataggacctccaggaggcattggtgacataggaatgaagggcgaaatcgggcctcaaggt
caacgaggtccaaagggcaacaaaggaaacatgggcttgataggaatacaaggcgtgaag
ggagacacaggagataaaggtgatgaaggaagtccaggacgtgatggagagatgggattt
acagggatgaaaggagaactagggttgacaggtggaaaaggagatgaaggaggtgttggt
gaacctggggtgcgaggattcaagggagacaagggagttatgggtgacatgggagagaag
ggagatatgggactaatgggtggaaagggtgcgaaaggagatgaaggcccaccaggtggc
agaggccctaaaggaaaccgaggcagcaagggtgacaaaggcaacaaaggcacgatagga
attaaaggcatcgacgggcctgagggtcctaaaggcaacaacggatctaaaggcgatcaa
ggcccagatggacctcccggtcgtcgaggcatgaaaggagacaagggggtaatgggaaat
atcggcgaaaagggaattaaaggtgatattggactgcccgggggtcgaggagaaccaggc
cgagatggtaacgatggtctgaaaggagaaaggggcgagaaaggcctgaaaggggacatg
ggagctaagggggataagggaatgacggggccgaagggagacagaggtgaagacggagtt
gatggagagatgggacctaaaggcaatgagggtgacaaaggcatgaaaggtgaaagcgga
ctacaaggaccaccaggaccatcaggacgtaatggatctcgtggcgacaagggtgaacct
ggtgataaagggaccagaggcaggaaaggtgacacaggcaaagaaggtgttaaaggttca
cgtggtccagaaggtgctaagggtgtggatggtggagatggaccccctggacaacagggg
ctcccgggaatggacggtggtaggggggagaaaggagataaaggcaacgatggagcaaat
ggcacaaaaggagagaacggtgaagtgggactgaaaggcaatagaggcactatgggagac
aaagggcagcgaggtcgaaaaggcgatgagggagatgaaggagacgaaggacagaatggt
gatcgaggcccaaagggagaacctggtaatataggcgatggaggtatgaaaggtgatcaa
ggcctaaaaggatccgacggccctaaaggtaacccaggatcgtcacgagctggatggctt
ctaacacgacacagtcaaactgcaaggttacctgaatgccctgagaactacacacgcctc
tactatggatacagtttcttgcagtcacatggaaacggctacggtcgagctcaggatttg
ggaaaaccgggatcgtgcttgaaattctttaacacaatgccgtacatgcactgctcaagt
agtgatacttgtcacatagcaggaggaagtgacagcagctactggctcacaactgatgct
ccaatgccaatgagcaacgttaaaaacagcgacatcgatcgatacatcagtcgttgcgtt
gtgtgcgaaggagcatccagagtcttagcagtacacgctcagacaggcagcacacctgat
tgcccatctggatggggcagtctctgggacggctacagctacgtggcgcaaacgaacaat
ggagccgaaggtggtggacagtcgctctcatccgctggatcatgtctggaaaacttcagg
attgtgccattcattgaatgcctatcgcgaggcgaatgtcgttactcgccacctggtctc
agcttttggctcacgaccatcgacacagtagaccaattccggcaaccgaacgacgagacg
ttaaaaggaccaattgactcaatacgacgtgttagtcgatgccgcgtgtgctacagacat
agcagcacacttggtttctga
DBGET
integrated database retrieval system