Corticium candelabrum: 134177543
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Entry
134177543 CDS
T11492
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cclm Corticium candelabrum
Pathway
cclm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134177543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134177543
03036 Chromosome and associated proteins [BR:
cclm03036
]
134177543
Enzymes [BR:
cclm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134177543
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134177543
mRNA degradation factors
5'-3' decay
Decapping complex
134177543
Chromosome and associated proteins [BR:
cclm03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134177543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134177543
NCBI-ProteinID:
XP_062500310
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All DBs
Position
3:7220972..7226279
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AA seq
439 aa
AA seq
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MATVVTPAPQTDPDKRTPQNLTESDDDWKSKLKVPERDRRYKTEDVTRTKGQDFEDYCLK
RELLMGIFEKGFEKPSPIQEESIPVALAGKDILARAKNGTGKTGAFLIPLLERVTADKDY
VQAMVLVPSRELAYQTSQICKELGKHLEIKVMVTTGGTSLRDDIMRLENPVHVVVATPGR
ILDLAERRVANLTQCSMLVMDEADKLLAMNQTGTIDRLIQQLPSGRQVLLFSATFPVSVQ
SFTEMHLNKPYEINLMDELTLKGITNFYAFVEEWQKVHCLNTLFSKLQVNQSIIFCNSVQ
RVELLAKKITELGYSCYYIHARMRQEHRNRVFHDFRAGHCRNLVCSDLFTRGIDIQAVNV
VINFDFPQTSETYLHRIGRSGRYGHLGLAISLVTEKDRYNLCQAEHELGTTISPIPRSVD
KKLYVATEEAPPSKEDGRQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggccacagtcgtcacgccagcgcctcaaacagaccccgacaaacggacgccgcagaat
ttgaccgaaagcgacgacgattggaaaagcaagctgaaagtgcccgaacgcgaccgtcgc
tacaagactgaagatgtgacacgcactaagggtcaggatttcgaggactactgtctcaaa
cgcgagctgcttatggggatatttgagaaggggtttgagaagccgtcgccgattcaggag
gagagcattcccgtcgctctggcggggaaggatatactggcacgggcgaagaatgggacg
ggaaagacaggtgcatttctcattcctcttcttgaacgagtgactgccgacaaagactac
gtccaagcaatggtccttgtcccttcacgagaactcgcataccaaacatcccagatctgc
aaagagcttggaaaacacctagaaatcaaagtcatggtgacgaccggaggaacaagcctg
agagacgacatcatgagattagagaatccagttcatgttgttgtggcgacgccgggtcgt
attctggatttagccgaacgacgtgtggctaaccttacacagtgctcgatgcttgtgatg
gatgaggctgataaactgctggcgatgaatcagaccggaacgatcgatcgtctcattcaa
cagttgccgtcaggacgtcaagttttgctgttctctgcgacctttcctgtctctgttcag
agctttacggagatgcacttgaacaagccatatgagattaacttgatggatgagctcaca
ctgaagggcatcaccaatttctatgcatttgtagaagagtggcagaaagttcactgcctc
aacactctcttctcaaagcttcaggtcaaccagagcatcatattctgcaactcggtgcaa
cgtgttgaattgctggcgaagaagatcaccgaacttggctattcgtgctactacatccac
gcgaggatgcgacaggagcatcgtaatagagtgtttcacgatttcagggctggacattgt
aggaacttagtttgctctgatctattcacacgcggaatcgacatccaagccgtcaacgtc
gtcatcaacttcgacttcccccaaacatcagagacctacctccaccgcatcggccgttcg
ggccgctacggccacctcggactggcaatcagtctcgtgaccgagaaagatcgttacaac
ttgtgccaagccgaacacgaactgggaacgacgatctcgcccatacccagatctgtagac
aagaaactctatgtggctaccgaagaggcaccaccgagtaaagaggatggacgccagtag
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