Corticium candelabrum: 134178022
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Entry
134178022 CDS
T11492
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cclm Corticium candelabrum
Pathway
cclm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134178022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclm04131
]
134178022
Membrane trafficking [BR:
cclm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
134178022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
134178022
NCBI-ProteinID:
XP_062500784
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All DBs
Position
4:1212416..1217480
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AA seq
805 aa
AA seq
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MPPTQLSPQEEQEKFLDEASMIVKKEAFQMKRCLDKTRLMDALKHASNMLGELRTSMLSP
KSYYELYMQISDELQHLELYLIDEYRKGQPISDLYELVQYAGNIVPRLYLLITVGVVYIK
TRLSSRKDILKDVVEMCRGVQHPLRGLFLRNYLLQCTRNMLPDTGEEIEDCTVGSGDAAH
YDGEVADSVDFILLNYSEMNKLWVRMQHQGHTRDKDKREQERQELRLLVGTNLVRLSQLE
GVDVGLYKKAVLPGVMEQVVNCKDAIAQEYLMECVIQVFPDEFHLQTLNDFLQSCSELQQ
SVNVKNIVISLIDRLAAFAQRDDSPGVPSSVKLFDIFSQQIAAIIQSRPDMPPEDIISLQ
VALVNLALKCYPDRVDYVDKVLEYTLEIFGRFSVDNVDVNSAVSKELLHLLKIPVDSYNN
ILTVLELSHFAPLFDHFSYAARKEMSLYVINNVLEHGTLIPSQEKVDALLQMVNTLVVDQ
ADQAEEMDLEDFAEEQVLMGRLIHLFQADSPDHQYLILNAARKHFGSGSEKRIRYTLPPL
VFSAFKLACWYNSKQTEDEKWSKKCQRIFQYCHQTISALAKAEGMAELSLRLYLQGAQSA
DQIQFETCETVAYEFMSQAFTLYEEELGDSKAQLAAITLIVATFERMSCFGEENHEPLRS
QCAVTASKLLKKPDQCRGVAVSSHLFWSGRTKDSPEDGTLDGKRVMDCLRKSLRIANQCM
ESSAQVQLFVEVLNRYLFYYEKGCEEVTTAVLKQLIDKIREDMSGLEANEETEQINKHFQ
TTLVHIRHKQEAGDPSGRDYAGLVL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccacacaactttctcctcaagaggaacaagagaaatttctcgatgaggcctcc
atgatcgtcaaaaaggaggcgttccaaatgaagcgttgcctggataaaacacgtttgatg
gatgcgttgaagcatgcgtctaacatgttaggagagctgaggacgtccatgctgtcaccc
aagagttactatgagctctacatgcagatatcagatgagctgcagcatcttgagctttat
ctcatagatgagtacaggaagggacaaccaatcagtgatctgtatgagttggtgcagtac
gcaggaaacattgtacctcgcttgtatttgttgattactgtgggtgtggtgtatatcaag
acacgtttatcatcaaggaaggacatactgaaagacgtggtggagatgtgtcgtggtgtg
cagcatccactgcgaggtcttttcttgaggaattatttgttgcagtgtacacgaaacatg
ctaccagatacaggagaagaaatagaagattgcacagttggtagtggtgatgcagcacac
tatgatggggaagtggctgattctgttgacttcatcctcctgaactactccgagatgaac
aagttgtgggtgagaatgcaacaccagggccacacacgagacaaagataaaagagagcaa
gaacgtcaagaacttcggttgcttgttggtacaaaccttgttcggctcagccagttggaa
ggagtagatgtaggtctttacaagaaggccgttttgccaggtgttatggagcaggtggtg
aattgtaaagatgcaattgcgcaggaatatctcatggagtgtgtcattcaggtatttcct
gatgagtttcatcttcagacactgaatgattttcttcagtcatgcagcgagttgcaacag
tcagtcaatgtgaagaatattgttatttctttgattgatcgacttgctgcctttgctcaa
cgggatgattcacctggtgtaccaagcagcgtcaaactttttgacattttttcacagcaa
atagcagctatcattcaatctcgacctgatatgccaccagaagacattatatctcttcaa
gttgctcttgttaatcttgccttgaagtgctacccagacagagtagactatgtggacaaa
gtactggagtatacgctggaaatatttggacgtttcagtgtagacaatgttgatgtgaat
tcagctgtttccaaggaactgctacatctcctcaagattcctgttgactcatacaacaac
atcttgactgtccttgaattgagtcactttgctcctttgtttgatcatttcagctatgct
gccagaaaagagatgtctctgtacgttatcaacaatgtcctcgagcatggcacattgata
ccatctcaggagaaggttgatgccttactacaaatggtcaacacacttgttgtggatcag
gcagatcaggcagaggagatggatctagaggactttgcagaggagcaggtgttaatgggt
cggctcattcacttgtttcaagccgattctcctgatcatcagtatctgattttgaatgct
gcaaggaagcactttggcagtggcagtgaaaaacgtatccgatacactttacctcctctt
gtcttctcggcattcaagcttgcttgctggtataacagcaaacaaactgaggacgagaaa
tggtcaaagaaatgtcagcgtatattccagtattgtcaccagacgattagtgcccttgcc
aaggcagagggcatggcagagttgtcgttacggctgtacttgcaaggagctcagtctgct
gatcaaatacagtttgaaacatgtgaaactgtggcatatgaattcatgagtcaggcattt
acactgtatgaagaagagctcggtgactcaaaggcacaacttgcagcgattacattaatt
gttgccacctttgagagaatgagctgctttggagaagaaaaccacgaaccacttagatca
cagtgtgcagtgacagcatccaagctgctgaaaaagcctgaccaatgtcgaggtgttgca
gtgtcatctcacttgttttggtcaggccgaacaaaagacagtccagaggatgggactctt
gatggcaagagagtaatggactgtcttagaaagtctctccgtatcgccaatcagtgcatg
gaatcatcagcacaagttcaactttttgttgaagttctcaatcgctatctattttactat
gaaaaaggctgcgaggaggttacaaccgctgtgttaaaacagttaattgataagatccgg
gaagatatgtctggattggaggcaaatgaagagaccgagcagatcaacaagcactttcag
acaacgctagttcacattcgtcacaagcaagaagctggtgatccaagtggtcgggactat
gcgggcttggtgttgtag
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