Corticium candelabrum: 134178391
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Entry
134178391 CDS
T11492
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cclm Corticium candelabrum
Pathway
cclm03013
Nucleocytoplasmic transport
cclm03015
mRNA surveillance pathway
cclm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134178391
09122 Translation
03013 Nucleocytoplasmic transport
134178391
03015 mRNA surveillance pathway
134178391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134178391
03041 Spliceosome [BR:
cclm03041
]
134178391
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134178391
Spliceosome [BR:
cclm03041
]
Complex C
Other components
EJC/TREX
134178391
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
134178391
NCBI-ProteinID:
XP_062501253
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Position
4:complement(1880153..1883969)
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AA seq
592 aa
AA seq
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MADVDAVLLHGKPLESCKVRDLKDELKRRGLSCTGAKATLRDRLKEVLSREVDGNEIVSS
TVSLAAEAGEEKTVDGDDHVDTGQHEVPQDTKQTDQIRTTGIGNGTEQTDEIDKKGVSCS
SVVEKEEEKEEREVNQSDSVGDHAEEMDNSGEEGKARLSVPDQRIKGPRSPGADASEIAM
ETMIVQPGARKRRLVIHKSSKRDTDHTVEMPKKKRAWGVSNTDKPQVASVQISTDSLKEI
IPDDVASAVEKVADGEESDTSNDAEDNDNRRSREGAGARRSLSQGDVDVSERPSRQKISL
RQQRLSGSAPGAARIAARGITEAIASTQDVNRTRRTPSPARNPLSCILHVTNLVRPFSLP
QIKEFLTQKGQLENDGFWIDKIKSHCYAMYTNQEEAQAMREVMHGLKWPITSPKFLSVDF
ATREELNRAMGIADTPTVPPPVTITEESSKDTKGGLAETSPVVPNMTDTQRQVVEETEAP
RPDSASAAKLLDNLFRKTKTQPAIYWIPLTDEQVLLRNKKRKEEEARVQRLREERQRERE
KERENERVEQQSRRNRNREGDRDRRDHQTRSGTFDRDRRRSRSRSNDRSRRR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgacgcggtgttacttcatggaaaaccgctggaatcatgtaaagtccgc
gacctcaaagacgaactgaaacgaagaggattatcgtgcaccggggcaaaagcgacctta
cgcgaccgtctcaaagaagtcttgagcagggaggtggatgggaacgaaatagttagtagt
actgttagtctagctgctgaggccggcgaggagaagacggtagacggcgatgatcacgtg
gacacaggacagcacgaggtaccacaagacaccaagcaaacagaccaaattagaacgact
ggaattggtaacgggacagaacaaacagatgagatagacaagaagggcgtgtcttgcagt
tctgttgtggagaaggaggaggagaaggaggagagagaggtcaatcagtcagacagtgtt
ggagatcatgctgaagagatggataattcgggagaggaagggaaagctcgactgtctgtt
ccggatcaaagaattaagggtcccagatctccaggtgccgatgctagtgagattgctatg
gaaaccatgattgtgcaacctggagcacgtaaacgtcgtttggttatacacaaaagctcg
aaacgagatacagatcatacggtggaaatgcctaagaaaaagcgagcctggggtgtctct
aatactgacaaacctcaggtagcatctgtacagattagcaccgactcgctaaaggagatt
atacccgatgatgtggcgagtgctgtggagaaggtagctgatggcgaagagagtgacacc
agtaatgacgccgaagacaacgataacagacgatctagagaaggggccggtgccagacgg
tcactatctcaaggagacgtggatgtttcagaaagaccgtcacgacagaagattagtcta
agacagcaaagactatcaggatcagctcctggggcagctaggatagctgcacgagggata
acagaggcaattgcaagcacccaagatgtgaatcgtacccgccgcactccctcaccagcc
cgaaaccctctatcttgtattctgcacgtaaccaatcttgttcgaccgttttcgttacct
caaattaaggagttcctcactcaaaagggtcaactagaaaacgatggcttttggatcgac
aagatcaagtcacattgctacgctatgtatactaaccaggaggaagctcaggctatgaga
gaggtcatgcacggattgaaatggccgatcacgagccccaagtttttatcagttgatttt
gccacgagggaagaattaaatcgagcaatgggtattgcagacactccaaccgtcccaccg
ccagtaacaataacagaggaatcgagcaaagatacaaaaggtggccttgcagagactagc
cctgttgtgcccaacatgacagacactcaacgccaagtggtggaagagacagaagctccc
agaccggacagcgcatcagcagccaaattactcgacaatttgttcagaaagacaaaaact
caaccggccatctactggattcctctaaccgacgaacaggttttattgcgaaacaagaag
cgtaaagaagaggaagcgcgggtacagcggctacgagaggagcggcaacgagagcgcgaa
aaggagcgagaaaacgagcgcgtagagcagcaaagcagacgaaacagaaaccgcgagggc
gacagagaccgtcgggatcatcaaacccgtagcgggacctttgacagagacagacgtcgg
tctaggtcgcgtagtaatgacagaagccgtcggcgatag
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