Corticium candelabrum: 134179459
Help
Entry
134179459 CDS
T11492
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cclm Corticium candelabrum
Pathway
cclm04120
Ubiquitin mediated proteolysis
cclm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134179459
04120 Ubiquitin mediated proteolysis
134179459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclm04121
]
134179459
Enzymes [BR:
cclm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134179459
Ubiquitin system [BR:
cclm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134179459
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_16
zf-RING_UBOX
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-RING-like
zf-HC5HC2H
zf_RING_Vps8_fungal
zf-ANAPC11
FAR1_N
FANCL_C
Motif
Other DBs
NCBI-GeneID:
134179459
NCBI-ProteinID:
XP_062502340
LinkDB
All DBs
Position
5:join(952554..952682,952743..952835,952901..953053,954515..954563,954631..954734,954797..954923,954982..955081,955155..955528,955589..955672,955736..955944,956001..956091,956157..956352,956427..956682)
Genome browser
AA seq
654 aa
AA seq
DB search
MKILALTAASFVSTGAVVGYAFYRNQQFYPAMVYLVKSNPSMAVLYAQAFVFVMLLAKIL
RKVFFGQLRAAETEHLMERSWYAVTETCLAFTVFREDFSFWFVAMFTLLLFLKGFHWLTE
DRIDYMERSPVITWLFHVRATTLLLLLGTIDSLFIHHAYHVITTQGVSVQIVFGFEYAIL
LTLAVNAMAKYVLHTIDLQSENPWENKAVYMLYLDFFLGFVRVILYTAFMVIMIKVHTFP
LFSIRPMYMTIRAFRKSLSDVRLSRRAIANMNTLYPDATAEELAQSDVCIICREEMAGEG
CKKLPCTHIFHASCLRSWFQRQQTCPTCRMDILSPPVAAQAAADAVRVRQDRLQQQARQD
RREQQSQPPAAPRQQPAAPPAPAGPMPQPPFGLWQLHQPPFFPPGMPAANAVPRPENIEQ
QGQLATGGQQQQQQDQPAAILTDGTTATTEPRAAASVEEVASATNEQPPQMPGQFSMPGM
AAAMPPFMPPPFMFSPPMFGFPPMPGGFPPFPNLNVPLGSLSDEQLRELEGRERANVEAR
VALLRNVHSLLDTAITQLHQYSQAAAVNTGLSPPVPPSFTRASADEEQAVYVSASVEETS
ETDVGREYVSTDTHVLGDQDLRQRRLSRFDSSPATVERQTSSIPDETREDDESG
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttagcgttgacggcagcaagtttcgtctctacgggtgctgtggtgggctac
gccttctaccgcaaccaacagttttatccagcaatggtctatctcgtcaaatcgaacccc
agcatggccgttttgtatgctcaagcgtttgtgtttgttatgctactggctaagattcta
cgtaaagtttttttcgggcagctgagagctgcagaaacggagcatctgatggaaaggtct
tggtatgctgtcacggaaacgtgtctagcgttcactgtcttccgggaagactttagtttc
tggttcgtcgcaatgtttactctgcttcttttcctgaagggatttcattggctgacagaa
gacagaattgattacatggagaggagtccagtcattacttggttgttccatgtcagagca
actacactcctactgcttcttggaacaatcgattcattgttcattcaccatgcttatcat
gtcatcacaactcagggtgtctcagttcagatagtctttgggtttgaatatgcaatcctt
ctcacattagctgtcaatgccatggcaaagtacgttctccacaccattgatctgcagagt
gaaaacccttgggagaacaaggctgtttacatgctctaccttgacttttttctaggattt
gtgagggttattttgtatactgcgtttatggtgattatgattaaagtacatacgtttcct
ttgttctcgatacgaccgatgtacatgacaatcagggcgttcagaaagtctctgagcgat
gtgaggttatcacgacgagctatagctaacatgaatactttgtatcctgacgctacagca
gaagaattggcgcagagcgatgtgtgtattatatgccgggaagagatggccggtgaagga
tgcaagaagttgccgtgcactcacatctttcatgccagctgcttgcgttcgtggttccaa
cgccagcagacgtgtccgacgtgccgcatggacatactgagtccgcccgtagcagctcaa
gcggctgcggacgcagtgagagtgagacaggacagactccagcaacaggcaagacaagat
cgacgtgaacagcagtctcagccacctgccgcaccacgtcagcaaccagctgcaccaccg
gctcctgctggtccgatgcctcaaccaccgtttggtctatggcagctacatcagcctcct
ttctttcctcctgggatgcctgcagccaatgctgttcctcgacctgaaaatattgagcaa
caggggcagttggctacaggtggacaacaacaacagcaacaagaccaacctgcagcgata
ttgacagatggaacaaccgcaacgacggagcctcgtgcggcagcttcagtcgaagaagtt
gcatcagctacaaacgagcagcctccacaaatgccaggacagttttccatgccaggtatg
gctgccgcgatgccaccttttatgccgccaccgttcatgttctcaccgccaatgtttggc
tttcctcctatgccagggggatttcctccgtttcctaatttgaacgtcccgctcggtagt
ctgagtgatgaacaactgcgggagttggagggacgagagcgagcaaacgtggaggctcgt
gtcgccctgttacgcaacgttcactcgctactcgatacagcgattacgcagttgcatcaa
tacagtcaagccgctgctgtgaacaccggactctctccgcccgttcccccgtcgtttacg
agggcgtcggcagatgaagaacaagctgtgtacgtttctgcttccgtggaggagacgagt
gagacggatgtaggcagggagtacgtttcgacggacacgcacgttctcggggatcaagac
ctacggcaacgacgtctgtcacgctttgattcgagtcctgcgacagtggagagacagact
agtagcataccggatgagacacgcgaagatgatgagtctggttag
DBGET
integrated database retrieval system
