Corticium candelabrum: 134179468
Help
Entry
134179468 CDS
T11492
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
cclm Corticium candelabrum
Pathway
cclm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134179468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclm03009
]
134179468
Ribosome biogenesis [BR:
cclm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
134179468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
TIP49
AAA_5
AAA_2
AAA_14
AAA_16
AAA_28
NPHP3_N
AAA_22
AAA_33
AAA_18
AAA_17
ABC_tran
nSTAND3
RNA_helicase
Mg_chelatase
AAA_3
ATPase
Rad17
Viral_helicase1
TsaE
IstB_IS21
NACHT
Cytidylate_kin2
Parvo_NS1
NB-ARC
Zeta_toxin
Sigma54_activat
AAA_7
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
134179468
NCBI-ProteinID:
XP_062502351
LinkDB
All DBs
Position
5:7998702..8003419
Genome browser
AA seq
882 aa
AA seq
DB search
MDRTLVDEQSVKNRKALKRSRNVESFFDKRLLGRIREYIASHGGKPSRTAVPDMAEYLQK
NYTEYSRRKRQAFRNLVQRVCYSLAKQEDESRLEKIENKYLQRQFKRHRSDESGTVTPIE
QISDLSDSDSSIVDDAVIVVKDTNMLNRSLVSVYKSGSEPQTPSQSVEINNETLDENSTV
RELNQSAYNTGILESDRKISNRSKQKRRKVIKSQEDQAKKSVTGLEPHIMFVTLVRCFNC
LLCENFQLYKACLIFIACTSVLLKYSFCVSADIQTTKPSVTFADFGDTENILEELTKLLL
HMLHPEVYKHLGITPPRGFLLHGPPGCGKTLLANAIAGELGFPFIRVAATELVSGVSGES
EEKIRTLFSHSKSLAPCIVFLDEIDAITPKRETASKDMERRIVAQLLTCMDELDEHSVKT
GSHVLVIGATNRPDSIDPALRRAGRFDREISLGIPNEKARQRILKVLCKDLTLSEDFDFE
YLARQTPGYVGADLMSLIREAAVVAVNRIFRCLQGEATEETKSDKESRLSNLFKTKADQE
SGVQKEEKNALSVSQLQDCGPLSEESLCKLFISLADFEVALSVVQPSAKREGFATVPDVA
WKDVGALSHIKDELSLSILAPVRHADDFAALGLSSSSGVLLAGPPGCGKTLLAKAIANES
GINFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEIDSLCPRRSHTGDTNVS
ARVVNQMLTEMDGLELRKHVFVIAATNRPDIIDPAILRPGRLDKTLYVGIPSPDDRVGIL
KAITNDGSKPPLETTVDLEMIGRDERCSGFSGADLAALVREAAMGLLKEKMTSEASTAGS
PPPSLCLSHKHFEIAFTKVKASVSAKERERYSQMTHKEGLRS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtacacttgtcgacgaacagtcggtaaagaatcggaaggctttgaagcgatct
agaaacgttgaatcattttttgacaaacgtctcttgggaagaattcgagagtacatagca
agtcacggtggaaagccttccagaacagctgtccctgacatggcggaatatctgcagaaa
aattacactgagtatagtcgtagaaaaagacaagctttcagaaatctagtacagagagtg
tgttacagtcttgcaaagcaagaagatgaaagtaggctcgaaaagattgagaacaaatat
cttcagcggcaattcaagaggcatagaagtgatgaatcaggaactgtaactcctattgaa
caaatttctgacctaagtgacagtgattctagcattgttgatgatgctgttattgttgtt
aaggacacaaatatgttgaacagatcactggtttctgtatacaagtcaggctcagaacct
caaactccatctcagtctgtagagattaacaatgaaacacttgatgaaaattcaactgtg
agagagttaaatcaaagtgcctacaatactggaatattggaatcagatagaaaaatctca
aatagatcaaaacaaaaaagacggaaagtgataaagtctcaagaggatcaagcaaagaag
tctgttacaggtttggagccacatattatgtttgtgacacttgtcagatgttttaattgt
ttactttgtgaaaacttccagctttataaggcttgtcttatcttcattgcttgcacttct
gttttgttgaagtattcgttttgtgtttctgcagacatacaaactacaaagccgtctgtc
acatttgctgattttggtgacaccgaaaacattcttgaagaactcaccaagctgctctta
cacatgcttcatccagaggtgtacaagcacttgggaataacacctcccagaggttttctt
ctgcatggtccacctggctgtggtaaaacactgctggcaaatgcaattgcaggggaactt
gggtttccattcattcgagtagcagcaacagagcttgtttctggagtgtctggagaatca
gaagagaaaattagaacattgtttagtcactcaaaaagtctggctccttgtattgtgttt
cttgatgaaattgatgcaattacaccaaagagagagactgcctcaaaggatatggaaagg
agaatagtagctcagctactaacctgtatggatgagcttgatgagcacagtgtgaagact
gggtctcacgtgttagttattggtgccacaaaccgtcctgacagtatcgatcctgctctt
cgtagagctggacgatttgatcgtgaaataagtttaggaataccaaacgagaaagccagg
caacgtattttgaaggtgctgtgcaaagatctaactttaagcgaagactttgattttgag
tatttggcaagacaaactcctggctatgttggcgctgatcttatgtcgttgattcgagaa
gcagcagtagtggctgtgaataggatctttagatgtctgcagggtgaagcaacagaagaa
acaaaatctgacaaggaaagtcgtctctctaatcttttcaaaacaaaagcagatcaagaa
agtggtgtccagaaggaagaaaagaatgcattgtctgtaagtcagcttcaagactgtggt
ccactgtctgaagaaagcctttgcaaactatttatttcactggcagattttgaggttgcc
ttatctgtagttcagccatctgctaaacgagaaggatttgctacagttcctgatgtcgcg
tggaaagacgtcggtgctctcagtcacatcaaggatgaactgtcgctgtccattttagca
ccagtcaggcatgcagacgactttgctgctctcggtctttcatcatcatctggtgtctta
ctagcaggaccacctggctgtggcaaaacactgcttgcaaaggctattgcaaatgaatct
ggaatcaactttatttcagtgaaagggcctgaacttctcaatatgtatgtcggggagtct
gagagggctgttaggcaagtatttcagcgggctcgtaattcagctccttgtgtcatattc
tttgatgaaattgattccctatgtccacgacggtcacatacaggcgatactaacgttagt
gcacgagttgtcaatcagatgttgactgaaatggatggacttgaactgaggaaacatgtt
tttgtaatagcagctacaaatcgacctgatattattgatccagcaattttgagaccagga
cggctagacaaaactctatatgtgggtataccatctccagatgatcgagttggtattcta
aaagcgataacaaatgatggctctaaacctccactggagacaacagttgacctcgaaatg
attggtcgtgatgaacgatgctctggcttctcgggagctgacttagctgcattggtcaga
gaggcggcgatgggacttcttaaagaaaagatgacatcagaggcaagtacagcaggttct
cctcctccttcactgtgcctctcacacaagcattttgagattgcatttacaaaagtcaaa
gcatctgtatctgccaaagaaagagagaggtactctcaaatgacacacaaggaagggtta
agaagttaa
DBGET
integrated database retrieval system
