Corticium candelabrum: 134180313
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Entry
134180313 CDS
T11492
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cclm Corticium candelabrum
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclm03009
]
134180313
Ribosome biogenesis [BR:
cclm03009
]
Eukaryotic type
90S particles
Other 90S particles
134180313
Pre-60S particles
Other pre-60S particles
134180313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
CLASP_N
HEAT
HEAT_EF3_N
Vut_1
Motif
Other DBs
NCBI-GeneID:
134180313
NCBI-ProteinID:
XP_062503432
LinkDB
All DBs
Position
1:7278043..7312573
Genome browser
AA seq
1274 aa
AA seq
DB search
MTRLKASKSAHRWRTGHSSSSNPKIYKFRNQAKCRELGGHVSSAKSSSALTAEALARHDD
GLESDITMTKEDDQFTMEGKKSARSAWTLETEFAGGTYNGTAFHCVQRLWNSSLASHRQI
CAVLAAVTEVMKSQGGSMTDNEYFAALMTALESAENEEIATALAVLLSIVIDRISNVVLK
SKFSLCSKVLSNKLRVYSSTQTSSLLKSLVVCLAALLAAQEKAVWSESSTVQMLHSLLSH
TVSSKPKVRKAAQQAICNLVKHAPKSIISSEVASFCVHELERHGGSTDSRRAVYTLALLR
GVIVMLSRPNLKSSCECLLRLMTLGNAVVMGLVMEVFVTLFSSESTDLTARVNAQLINAL
NDYQPSVKDMQPLQAWLNVVKSAHVNLQRLDYHLCYTHLPHFFSTCVKCLLSPHDMIIQV
ASEAMKDVLLKCVAPHVEKVVLAAGGSLKGKNSILEKIFRLIESGLKYRYHAAWCQVLEI
IQIAFNVMGKACSDIIVPQVVMSLCNLHGIPNFSYIPQLEAAVGAAVQSVGPRLVLEAVP
LELDRDDVSSEFSRAWLLPVLKRYIQRTELDYFTTVLLPLAARLRNKAVMLSNSHRKLEA
KIYNTLQSQIWFVLPSFCRNPVDLKQSFKNIAQILGVALNERPELRNTICHALCLLIEGS
RGTDEQTVLSHFSKNFLPILFNLHTSEPDLMTSSLLSCVAAFLSVSDQQLVNSLFGKVGV
KLTSDIDKATKQAVMELALLMVPYVSQKSLSMLYKAISVLLESDDNALQKRAYKILQQMC
SCESDQHQSFVENHLDALQTKLLTSLSSAATSSKRARLKCLSAIVHRLRKDGTNFISLVT
PEVILCTKEVNEGARTEAYRLLVELANAQNRCCDDTYEVNITRYFHLVLAGLAATSPHML
SATILSLGCLAYEFKDLLSHSMIQKLLSSMKVLLASRSREVIKATLGFIKVIISILEPSD
LMPHVQELIFNMVSWSKDTKYHFRQQSRLVFQRLARKLGYEMIFNLVPESHRKLVAHVRK
TAERAKRKKAGKQESRDKNVMQSYEEILCSSEEEEPTRTKKFQSRNEQAAGIKGKRKSDQ
QAWIQEGPEHEPIDLLDRSVVKRVVATDPFLSQTKPQLEQFEESSDGKLIIKDAENDVVD
VSYFGNVESSSRISDRKRKRTKSGSEDVTIDLKETVAKRPYLGIHRTLPTGQMKFPDYGV
EYRAKKAKGDIKLKGKSDPYAYVPFDFGKLNKRKQAKLTGQFRGVMSAASKGVQRAQKSR
TRSHIRKKRSKSQR
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtttgaaagcaagtaagagtgcccatcgatggagaacagggcacagcagtagc
agcaatccgaaaatttataaatttcgaaatcaggcgaaatgtagagagcttggaggtcac
gtgtcatcagccaaatcatcatcagctctgacagcggaggcattggctagacacgatgat
gggttggagtcagacatcacgatgacaaaagaagatgaccagtttacgatggagggcaag
aagagtgcgagaagtgcgtggacgttggagacagagtttgctggcggaacgtacaatgga
acggcatttcactgtgtgcagagattgtggaactcgtcattagccagtcatagacagatt
tgtgcagtattggctgctgttactgaggttatgaagagtcaaggtggctcaatgactgac
aatgagtattttgcagcattgatgacagctcttgagtctgctgaaaatgaggaaattgca
acagctttggcagtattgcttagcattgtcattgacaggatttctaacgttgttttgaag
agcaagttctcactttgcagtaaagttttgagcaacaagttgagagtttactcctcaact
caaacatcatctttactgaaatcgctcgtggtttgtctagcagcactactagccgctcaa
gagaaagcagtgtggtctgagtcgtctacagtccagatgctgcattctttgttaagccat
actgtgtcatctaaaccaaaggtgagaaaggcagctcaacaagccatttgtaacttagtg
aaacatgcaccaaagtccattatttcaagtgaggtggctagcttttgtgttcatgaactg
gaaagacacggaggttctactgattcaagaagagctgtttatactttagctcttcttcga
ggtgtaatagtgatgctttctcgaccaaatttgaaatcatcttgtgaatgcttgcttcgc
ctcatgactcttgggaatgctgttgtgatggggttagtgatggaggtctttgtgacctta
tttagcagtgaatctacagacttaactgctcgagttaatgctcagttgattaatgcactc
aacgactaccagcctagtgtaaaggacatgcagcctttacaggcatggctgaatgttgtg
aaaagtgcacatgtcaatttgcaaagactagattatcatctttgctatactcatcttcct
cacttcttttccacgtgtgtaaaatgcttactctcacctcatgacatgattatacaagta
gcatctgaagcaatgaaggatgtgttgctcaagtgtgttgcaccacatgtggagaaagtg
gtgttagcagctggtggtagtcttaaaggcaaaaatagcatcttggagaaaatattcagg
ttaatagaatctggtttgaaatatcgttatcatgctgcatggtgtcaagtgttagagata
attcaaattgctttcaacgtgatgggcaaggcttgctctgatatcattgtgcctcaggtt
gttatgtctttgtgtaacctccatggaatacccaacttctcatacattcctcaacttgag
gctgctgttggcgctgcagtacaaagtgttgggccaagattggtgttggaagctgtacca
ttggaactggacagagacgatgtatcgtcagagttttcaagggcttggcttcttcctgtg
ttgaagcgttatatccaacggacagagttagactattttactacagtgttgctacctcta
gcagctcgtcttagaaacaaagctgtgatgctgagtaatagtcataggaagttggaagca
aaaatatacaacacccttcaatcacagatttggtttgtgctgccaagtttttgtaggaat
ccagtggatttgaagcagtcattcaagaacattgctcaaattcttggagtggctttgaat
gaaagacctgagctgagaaatactatttgccatgctctttgtttgctcattgagggaagt
agaggcactgatgaacaaactgtcctctctcacttttccaagaatttcttgcctatcctt
tttaacctgcacacatcagaacctgatttaatgaccagttctctcctttcctgtgttgca
gcttttctgtctgtatcagatcagcagttggtcaattcattatttggaaaagttggtgtg
aaattgacttcagatatcgataaagcaacgaagcaagctgtgatggaacttgcattgctg
atggtgccatatgtcagtcaaaagagtctttctatgctttacaaagccatttcagtactg
ctggagagtgatgacaatgcattgcagaagagagcttataagattctacagcagatgtgt
tcgtgtgagagtgaccaacatcagtcatttgtagaaaaccatttggatgcattacagaca
aaacttcttacttctctgtcatcagcagccacatcatcaaagagggctaggttgaagtgt
ttgtcagccattgtgcatagactgaggaaagacggaacaaactttatttcattggtcaca
ccagaagtaatattgtgcacaaaggaagtcaacgaaggagcaagaactgaagcatatagg
cttcttgtagagctagcaaatgctcaaaatcgctgttgtgatgacacttatgaagttaac
attacccggtattttcatttggtactggccgggttagcggctacgtcaccacacatgcta
agtgcaacaattttgtcacttggctgtctagcatatgagtttaaagatctcctgagtcat
tctatgatccagaagcttttgagtagtatgaaggtgcttcttgcgtcacgttcacgtgaa
gtcattaaagcaactcttggctttataaaggtgattatatcaattttagaaccgtctgat
ttaatgcctcacgtacaagaattgattttcaatatggtgtcatggagcaaagacacaaag
tatcatttcagacaacaatctcgtttagtttttcagagactggctagaaagctaggatat
gaaatgatattcaatttagttccagagagtcatcgaaaactagtagctcatgttagaaag
acggcagaacgagcaaagagaaagaaggccggaaagcaggaatcaagagataagaatgtg
atgcaaagctacgaggagatactgtgtagttctgaagaagaagagccaacaagaaccaag
aaatttcagagtcgtaacgaacaagctgctggaattaaaggaaagagaaagagcgaccag
caagcgtggattcaagaaggaccggaacatgaacccattgacttgctagatcgcagtgtt
gttaagagagttgttgcaactgatccatttttaagtcaaacgaagcctcagttagaacag
tttgaagaaagctcagatggaaaattaatcatcaaagatgcggaaaatgacgtagtggat
gtgtcctactttggcaatgtggaatcaagttcaagaatttctgaccgtaaaaggaagcgt
actaagagcggaagtgaagatgtgaccatagatctgaaggagacggtagcgaagagacct
tatttgggaattcataggacactgccaacagggcaaatgaagtttccggattatggagtc
gagtacagagcaaagaaagccaagggagatataaagttgaaagggaagtctgatccctac
gcttacgttcctttcgattttgggaaactgaacaaacggaaacaagctaaacttactggt
cagttccgcggtgttatgtcggctgctagcaaaggcgttcagcgcgctcagaaaagtcgc
actcggtcacatatccgaaagaagcgttcaaagagtcaaagatag
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