Corticium candelabrum: 134180634
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Entry
134180634 CDS
T11492
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
cclm Corticium candelabrum
Pathway
cclm03430
Mismatch repair
cclm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
134180634
03460 Fanconi anemia pathway
134180634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclm03400
]
134180634
DNA repair and recombination proteins [BR:
cclm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
134180634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
ExsD
Motif
Other DBs
NCBI-GeneID:
134180634
NCBI-ProteinID:
XP_062503811
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All DBs
Position
5:complement(6146451..6156870)
Genome browser
AA seq
739 aa
AA seq
DB search
MALKALDAASVHRLCSSQVIVSLQTAVKELIENSLDAGATRIEIDLKQYGSELIEVSDNG
CGVEPSNFEGLTKRHGTSKLKEFSDLSSVTTLGFRGEALSSLCALSRLSLVTRHQSQSHA
TKIVMDSEGKIVEQTRVAREVGTTVTLENVFYSLPVRHREFMKNLKKEYGKLIQVVQGYC
LISVGVRITCSHQASHKGGKQIVLSNGPSQSMKENIACVFGAKEMGHLIAMEQCSEHDID
ISENKGLVPSAWPFRLIGFISKCERGSGRASPDRQFYYMNQRPVDLGKLSKTVNDVYHLY
NKQQYPVVVLDIETERERVDVNLTPDKREIIIQQEKLLLLLVKYSLIKLFDKSNHAAVAL
QVSSQQEPAEGKEQLVAKDTLWKKFSSSRDRRKSLADFTVGGAPAKKVKKFDRRAIQQRL
DKSLVSPAKPFMDPSFPESEIIDSLISNCNEVHLPLQEGGSMVQMESATLDVETMGGAAA
DRRALTVKCSTEMIRKRLNMQSATTGLSASSGSQFHARISSDANHVAERELQREFRKESF
EKLEVIGQFNLGFIIAKLGSDLFIIDQHASDEKYNFERLQKTTVLEHQKLIVPKRLQLSA
ANEIILQDHVGDFARNGFTFSFDPEAEPGRRVHLTGNPVSKNWLFGAEDVDEMLFLLSDS
SDCVCRPSRVSAMFASRACRSSVMVGTSLTKQSMKQILLHMGQLDQPWNCPHGRPTMRHL
VNLSYLNETCRNYEALETK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaaaagcgctggacgccgcgtctgttcacagactctgttctagtcaggttatt
gtcagtctgcagacagcagtcaaagaactaatagagaacagcttggatgctggagcaaca
agaatagaaattgatctgaagcagtatggatcggaacttattgaagtgtctgataacgga
tgtggagttgaaccatcaaattttgaagggctcacaaagcgacatggaacatcaaagtta
aaagaattttcagatttgagttctgtgacaactttagggtttcgaggagaagcattaagc
tctctttgtgcgctcagccgtctgtctcttgtgacaagacatcagtctcagtcgcatgct
actaagattgtgatggatagtgaaggtaaaatagtggaacaaacccgtgtggcacgtgag
gtgggtacgactgtaacactagaaaatgttttttattctcttccggtacgtcaccgagaa
tttatgaagaatttaaaaaaggagtatggaaagctcattcaagttgttcagggttactgt
ctaatcagtgtgggtgttaggatcacatgcagtcatcaagctagtcacaaaggtgggaag
caaattgtattgtcaaatggtcccagtcagagcatgaaagaaaacattgcgtgtgttttt
ggagccaaagagatgggacacttaatagcgatggagcaatgctcagagcatgatatagac
atttcagagaacaagggtttggtaccttcagcttggccatttagattgattggttttatt
tccaagtgtgaacgaggatccggtcgtgctagtcctgataggcagttttattacatgaat
cagaggccagtggaccttggaaagctgtcaaagacagtgaacgacgtttaccatttgtac
aacaaacaacagtatcctgttgttgttttagatattgagactgaaagagagagagtggac
gtcaaccttactccagacaaaagagaaattatcattcaacaagagaaacttcttcttcta
cttgtcaagtattcactgataaagctatttgataaaagcaaccacgctgctgttgctcta
caagtcagcagtcaacaagagccagctgaaggtaaagaacagcttgtggctaaggacact
ctatggaagaaattttcttcatcaagagacagacgaaagtctctggcagattttactgtg
ggtggtgcaccagcaaaaaaagtgaaaaagtttgatagaagagcaatccaacagcggcta
gacaagagtttggtttcaccagcaaagccatttatggatccatcttttcctgaatctgaa
atcattgattctttgatttctaattgcaacgaggttcatcttcctcttcaagaaggaggg
tctatggttcaaatggagtcagctactctagatgtagagactatgggtggtgctgctgct
gacagaagagctcttactgtcaagtgcagtactgaaatgatcagaaaacgtctaaacatg
caatcagccacaactggattaagtgcttcctctggaagtcagtttcatgcacgaatctca
tctgatgcaaatcacgtggctgaacgagaacttcaacgagaattcaggaaggagtcattt
gaaaaattagaagtgattggtcagtttaatctcggctttattattgccaagctaggctct
gatctttttattatcgatcagcatgcatcagatgaaaagtacaattttgaacgtttacaa
aaaacgactgtgttggaacaccaaaagctaattgtacccaagagactgcaactgtcagct
gctaacgaaataattttacaagaccatgttggtgactttgcaaggaatggttttacgttt
tcatttgaccccgaggctgaacctggacgacgagtacacttgactggaaatcctgtaagt
aagaactggttgtttggtgctgaagatgtagatgaaatgttgtttctcctctctgattcg
tcggattgtgtctgcagaccttctcgtgtttcagcaatgtttgcgtcacgagcgtgtcga
tcgtcagttatggttggaacatcactaactaagcaatcaatgaaacagatactcttacat
atgggacaactcgaccaaccttggaactgtccacacggcagacccacaatgaggcatctc
gtaaatctgtcttatttgaatgagacttgtagaaactacgaagcattggaaacaaagtag
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