Corticium candelabrum: 134181853
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Entry
134181853 CDS
T11492
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cclm Corticium candelabrum
Pathway
cclm03013
Nucleocytoplasmic transport
cclm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134181853
03015 mRNA surveillance pathway
134181853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134181853
Enzymes [BR:
cclm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134181853
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
134181853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
DUF1811
Motif
Other DBs
NCBI-GeneID:
134181853
NCBI-ProteinID:
XP_062505108
LinkDB
All DBs
Position
7:complement(2352743..2361769)
Genome browser
AA seq
503 aa
AA seq
DB search
MADSADWAAEVDSQERELSNRVKGIGISDAKTTSTPTTSAPTVTSAPAVASVEDDDWNES
PTVTADGDDQDKPLDAAEASYLTKVLRTKLVDSQVLGIEVQRRDPNSPLYSVKSFEELRL
QKQLLDGVYAMGFNKPSKIQETALPVLMAHPNFRPSNMIAQSQSGTGKTAAFVLAALSRV
NPENKWPQVLILAPTYELACQIGDVISKMAKFMISVKLTFAIRGEKVARGSTIQEHLIIG
TPGTVQDWMFRKRAFDPKKIDVFVLDEADIMINTQGFQDQSIRVRRALRDDCQVMLFSAT
YSDDVMSFARRVVAEPVIIRLKKEEETVENIKQYYVQCRNEDDKFQALSNIYGVVTIGQA
MVFCRTKKSAAWLAQKMTSDGHAVGLLTGDITVEQRIAVLNRFREGKEKLLVTTNVCARG
IDVEQVTVVVNYDVPLDTEMKPDYETYLHRIGRTGRFGKSGLAINFVDGRRSHENLMKIE
EHFGKKILKLSTDDVEEMEKLNQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagtgcggactgggctgctgaagtagatagtcaagagcgcgagctctctaac
agagtcaaagggatcgggataagcgatgcaaagactacgtctacccctacaacgtcggca
cctacggtaacatcggcacctgcggtagcgtcggttgaagacgacgattggaatgaatca
ccgaccgtcacagctgatggcgacgatcaagataaaccacttgatgctgccgaggcatcg
tatttgaccaaagtgttgagaacgaaactcgtcgattcacaggtgttagggatcgaggtc
cagagaagggatccaaactcgccactgtatagcgtcaaatcgttcgaagagcttcgactg
cagaaacaactattggacggtgtgtatgcgatgggattcaataagccgtcaaaaatacaa
gaaacggcattgccagtgttaatggctcatccgaattttaggccttcgaatatgattgcg
cagtcacagtcgggaaccgggaagacagcagcatttgtgctggcggcattaagcagagtg
aatcctgaaaataagtggccgcaggtgttgattttggctcctacgtatgagctggcttgt
cagattggagatgtcatatcaaaaatggctaagtttatgattagtgtgaagctgacgttt
gcgatcagaggagaaaaggtggctagaggatcaaccatacaagagcacctcatcattggc
acaccaggaactgtgcaagactggatgttcagaaagagagcattcgacccgaaaaagatt
gatgtttttgtgttggatgaagctgatatcatgatcaacacgcaaggtttccaagatcaa
tccattagagttaggagagcgttgagagacgattgtcaggtgatgttgttctcagctact
tacagtgacgatgttatgtcatttgcaagacgagttgttgccgagcctgtcatcatcagg
ttgaaaaaagaggaagaaaccgtcgagaatattaaacagtactatgttcagtgtcgcaat
gaagatgataagttccaagctctgtcgaatatctatggagtggtaacgattgggcaagca
atggtcttttgtcgaacaaaaaagtctgctgcttggctggcacagaaaatgacctccgat
ggccatgctgttggcctcctaacgggagacatcactgttgaacagcggatagctgttcta
aatcgcttccgtgaaggaaaagaaaagctccttgttacgacaaatgtctgtgccagaggc
attgatgtcgaacaagtcactgtagtagtgaactacgatgttccactcgacacagaaatg
aaaccagactatgagacttacttgcatcgtattggcaggactggccggtttggcaaatca
ggtcttgcaatcaactttgtcgatgggcgtcgttcacatgagaatctgatgaagatagag
gaacattttgggaagaagatattgaagttatctacggacgatgtcgaggagatggagaaa
ttaaatcagtag
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integrated database retrieval system
