Corticium candelabrum: 134182325
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Entry
134182325 CDS
T11492
Name
(RefSeq) regulator of nonsense transcripts 3A-like
KO
K14328
regulator of nonsense transcripts 3
Organism
cclm Corticium candelabrum
Pathway
cclm03013
Nucleocytoplasmic transport
cclm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134182325
03015 mRNA surveillance pathway
134182325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134182325
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
134182325
mRNA cycle factors
P-body specific factors
134182325
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
134182325
NCBI-ProteinID:
XP_062505708
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Position
7:complement(6272508..6276139)
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AA seq
390 aa
AA seq
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MALLTDTDITALLKKADREVYQTKVVVRRLPPSLTSDELVERLSPLPEHDYLYLAKADTS
LGQFAFSRVYINFKRFEDVITFRNRFDGFVFFGHGGRKYPAVVEFAPLQKIPHTKKIKDH
KCGTIETDKDYKTFLASLEAETPSVPTAESLLEQIEARQQQAVESTPLVDFIRRKHHSAK
SSSSKYASSAKFETLKSKRRKDDSAKVEKKTHSETKPATTKKDGKGKSSDYITGANERPV
SAKPVKKGPIKQDERRDIKHEKGVAQSDSKKSRWPDKELTSQTKPKSGGFATHEQDWPTL
GQTKSNEIGSHTRPSSAKEENTRKSVDTTSSARVKQGEGRKPRGRPSQEVYVPRAARLAQ
EGRSNGEERPSKPWGRGRGGQGHRQGAPNG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctcacagatacagacatcactgctctgctgaagaaagcggaccgagaagtc
taccagaccaaagtcgttgttcgtcgtcttcctccttcattgacgtcggatgagttagtg
gagagactctccccattgcctgaacacgattatttgtatctggctaaagctgatacgagt
ttgggtcagtttgcgttttcgagagtctatattaactttaaacgttttgaagacgttatt
acgttccgaaatcgctttgatggttttgtgttttttggtcatggaggaagaaagtatcca
gctgttgttgagtttgctcctcttcaaaagatccctcacacgaagaagattaaagaccac
aaatgtggcacaatagaaactgacaaggattataagacttttctagcttcactagaagct
gagacacccagcgttccaactgctgaatctcttcttgaacaaattgaggcaagacaacaa
caagcagttgagtcgacaccattggtggattttattcggagaaagcaccactctgcaaag
tcgtcctcttcaaaatacgcttctagcgctaaattcgaaactttgaaatcaaaaagaaga
aaagacgactcagcaaaggtggagaagaaaacacatagtgaaaccaagccagcaaccacc
aagaaagatggtaaagggaagtcgtctgattatattacaggagccaatgagaggccagta
tcagctaaaccagtcaaaaaaggtccaataaagcaggacgagagaagagacataaaacat
gagaagggtgttgcacaatcagactcaaagaaatctcgttggccagataaggagctcacc
tctcagacaaaacctaagtctggtggctttgcaacgcacgagcaagactggccaacttta
ggtcaaacaaaatccaatgagatcggctcccacactcgaccttccagtgcaaaggaagaa
aacactcggaagtcagtagacacgacttctagtgctcgtgtaaagcaaggagaaggacga
aaaccaagagggcgtcccagtcaagaagtgtacgttccaagagcagccagactggctcaa
gagggacgatcaaatggagaagagagaccgagtaaaccatgggggcgaggtcgaggcggg
caagggcatcgacaaggcgcaccgaatggttga
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