Corticium candelabrum: 134183338
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Entry
134183338 CDS
T11492
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cclm Corticium candelabrum
Pathway
cclm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134183338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134183338
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
134183338
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
134183338
NCBI-ProteinID:
XP_062506821
LinkDB
All DBs
Position
8:complement(join(6197687..6197843,6199890..6199990,6200049..6200157,6200211..6200301,6200957..6201061,6201134..6201202,6201268..6201385,6202324..6202398,6202457..6202603,6203022..6203270))
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AA seq
406 aa
AA seq
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MAVHWTCCIPRECINIERSSLLSDREWEALYSKAEEYLCRNDDVFDDSIRHVVVMNTIQH
ALPGRGVRSLPLAVQRNEDDPSLADVAILVVDARPCEFEAGFQAGGQTREHSVLARLLGV
TQLAVAVNKMDAIEWLQERFNEIVQKLGQFLKQAGFRESDVKYIPCSGLTGVNLIQLAEK
DKLSMWYKGPCLVDRIDAFKHVQRPLEKSFRCSVSDVFRIGGSGITVSGKIASGHIQVGE
VVAVMPAGDQALVKAISIHDDSTQWAVAGDHVCMTLTEIDISKTPVGSMLCDPSNPVRPV
LKFRARIIVFNIEIPITKGFPVMLHYQSVNEAAVINRLVSVLNKNTGEVIARKPRCLSKQ
STALVEIEPARSVCVELFKDFKDLGRFMLQSGGTTIAAGIVTDIIQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcattggacgtgttgcattccaagagaatgtattaatatcgagagaagtagc
ttgctgtctgatcgcgagtgggaagcattgtacagcaaagctgaggaatatttgtgtcgc
aacgatgacgtgttcgatgattctatccgccatgtggtcgtgatgaataccattcagcat
gcgcttccaggccgtggtgtacgtagccttccacttgctgttcaaaggaatgaggacgat
ccatcactggcagatgtcgccatcttagtcgtcgatgcccgtccctgtgagttcgaggcc
ggatttcaggctggaggccagacaagggaacactccgttttggcaagattgttgggcgtc
acacagttagctgttgctgtaaataaaatggacgcaatcgagtggttgcaagagcgtttc
aatgagattgtccagaaattaggacagtttctcaaacaagctggatttagggaaagcgat
gtgaaatacataccatgtagcggtttaactggcgtcaatttgatacaactagccgagaaa
gacaaactgagtatgtggtataaaggtccatgtttggtggacagaatagatgcattcaag
catgtacagcgtccgctcgagaagtcatttcgttgttctgtatcagatgtatttagaatt
ggtggatcgggaattactgtaagcggcaagatcgcatcgggtcatatccaagtgggtgaa
gtagttgctgtaatgcctgctggtgaccaagctttagtaaaagcaatttctattcacgac
gattcaactcaatgggccgtggctggcgaccacgtctgcatgacactgacagaaatcgac
atatcaaaaacgcctgtcggcagcatgttgtgcgatccgtcgaatcctgtccggccggtt
ttgaaattccgcgctcgaataatcgtgttcaatattgaaataccgataacaaaaggattt
ccggtcatgttgcattatcagtcggtaaatgaagcggctgtgattaaccgacttgttagt
gtcttgaacaagaacacaggagaggtgatcgcaaggaagccgagatgtttgagtaagcag
tcgactgctcttgtcgagatcgagccggctagatccgtctgtgttgaactatttaaggat
ttcaaagatctgggacggtttatgttgcaatcaggtggtactacgattgcagctgggatt
gtaacagatataatacaataa
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