Corticium candelabrum: 134183985
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Entry
134183985 CDS
T11492
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cclm Corticium candelabrum
Pathway
cclm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134183985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclm03021
]
134183985
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134183985
Transcription machinery [BR:
cclm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
134183985
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134183985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-C3H1
zf-CCCH_RBM22
zf-CCCH_2
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
134183985
NCBI-ProteinID:
XP_062507570
LinkDB
All DBs
Position
9:complement(1473139..1474944)
Genome browser
AA seq
242 aa
AA seq
DB search
MQEIICNVDDVIFDIEISLELQLGAQPLPFEGMDKSGAAICEFFLRNVCPRGSCCPFRHT
TGDKSVVCKHWLRGLCKKGDLCEFLHEYDMTKMPECYFYAKYGVCNNKDCPYQHIDPESK
MKDCPWYDRGFCKHGPHCRNRHTRRVLCQNYLCGFCVEGSHCKFVHPRFELPTYLSQGTS
NQGTKLELTHFEPQPYVPGVRRPLDQVTCFKCGEKGHYANRCPRGAGAMAVPQMRNAQTS
KS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatcatctgtaacgtagatgacgttatcttcgacattgagatatcgctcgag
cttcaactcggtgcacagccattgccctttgaaggaatggacaagtcaggtgctgctatt
tgtgaatttttcttacggaatgtttgccctcgtggaagttgctgtccattccgtcacaca
actggtgataaatctgtcgtatgcaaacactggctaaggggcttgtgcaagaaaggagac
ttgtgcgaatttttacacgagtacgatatgacaaagatgcccgaatgctacttctatgcc
aaatatggtgtttgtaacaataaagattgtccataccaacatatcgatcctgagtcaaag
atgaaagactgcccatggtacgaccgaggtttctgtaaacacggtccgcactgtcgaaat
cgtcacactagaagagttttgtgtcagaactacctttgcgggttctgtgtagaaggatcc
cattgcaaatttgtacatccacgttttgagttacctacatacctgagtcaaggtacttcc
aaccaaggaacaaaattagagctgactcattttgagccacagccttacgtgcccggagta
agacgaccactagatcaggtcacatgtttcaagtgtggagaaaagggtcactatgccaac
cggtgcccccgaggggcaggagcaatggctgtcccacagatgcgaaatgcacaaacaagc
aagagttga
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