Corticium candelabrum: 134184038
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Entry
134184038 CDS
T11492
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
cclm Corticium candelabrum
Pathway
cclm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134184038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134184038
Enzymes [BR:
cclm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
134184038
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134184038
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134184038
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
134184038
NCBI-ProteinID:
XP_062507625
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All DBs
Position
9:8463722..8483101
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AA seq
548 aa
AA seq
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MSERPGTRVKYDPPDPRRAYTIMSEEERQSGKKTNWHEIEITGSVRSLSPELWKLHFLTS
LFLNNNNLSRLPAEVSHLKCLAHLDVSCNKLRSLPVELGDMIQLRELLLNNNSLRALPYE
LGRLFLLQTLGLSGNPLSPEVINMVKEPNGTNRLLTFMLDNLSVCPRPPDRPWVQIRPID
RQRCGTTFTVMCYNVLCEKYATRQLYGYCPSWALIWEYRKQNIMKELIQYSADIISLQEV
ATDQFYNFFKPELARHGYDGVFSPKSRAKTMGETESMQVDGCGIFYRTSKFLLFEHYLVE
FNQLAMAYSEGADDMLNRVMPKDNIAIVALLEVKDVGILHLDQRQHILVSNSHIHWDPEL
RDVKLVQSMLLVHEIHQIAKQVATERGIGMQVSGSSEALPKGLNIPLVMCCDLNSLPDSG
VVEYLTTGRVRSDHPDFQKSLKYQGFLQRFMDRKHNHSPTSSGYVKHPFNLASVYNGHDI
PFTNFTYDFTGIIDYVVYTKDLLAPLGFLGKVSEEWLTQNKIIAYPHPHFSSDHIPLLTE
FEVVADQC
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagacctggaactagagtgaaatatgatccaccagacccacgccgagcgtac
acgattatgtcggaagaggagagacaaagcggcaagaaaacgaactggcacgagatcgaa
atcactggctctgtccgcagtctcagcccagagttgtggaaattgcattttctgacctcg
ctctttctaaacaacaacaatttgtctcgactgccggccgaggtgtctcacttgaagtgt
ctcgctcatttagatgtttcttgcaacaaactgcgcagtctgccggttgaactcggagac
atgatccaactgagagaactgcttctgaacaacaactcgcttagggcgctaccctacgag
ctgggcagactgtttttgctgcagacgctcggtcttagtggcaatcctctctctcctgag
gtgatcaacatggtgaaggagccgaacggcaccaacagacttcttacattcatgcttgac
aatctgagtgtttgtcctcgtcctccagatcgaccttgggttcaaatccgaccaatagat
aggcagagatgtggcacgacttttactgtcatgtgctataacgttttgtgtgaaaagtat
gccacaagacaactgtatggatactgtccatcatgggctctcatttgggaatacaggaaa
caaaacatcatgaaggagctgatccagtacagtgcagatattattagtttgcaggaagtt
gcaacggatcagttctataacttctttaaacctgaactggccaggcatggatatgacggt
gtttttagtccaaagtcaagagcaaagacaatgggtgaaacagaaagcatgcaagtagat
ggttgtggcatcttttatcgaacatcaaagtttcttttatttgaacactatttggttgag
ttcaaccaactggcaatggcatattcagaaggagcggatgacatgctaaacagagtcatg
ccaaaagataacattgcaattgtggcacttcttgaggttaaagatgttggaatactgcac
cttgaccagagacaacacattttggtttctaacagtcacattcactgggatcctgagttg
cgagatgtgaagcttgtgcagtcaatgcttcttgtacatgaaattcatcagatagcaaaa
caggtggcaactgaaaggggtattggaatgcaggtatcaggaagtagtgaggctcttcca
aaaggtttgaacatcccacttgttatgtgctgtgatctcaattctctcccggattccggc
gttgttgagtaccttacaactggacgtgttcgaagtgatcatcctgactttcaaaaaagt
ctcaaataccaaggcttcctacaacgtttcatggatagaaagcacaaccactctcccaca
tcctcaggctatgttaaacatcctttcaaccttgctagtgtttacaatggccatgatatt
cccttcacaaactttacgtatgactttactggcatcattgactatgtcgtgtacacaaaa
gatttgcttgctccgcttggttttctgggaaaggttagtgaagaatggttgacccaaaat
aagattattgcatatcctcatccacatttttcgtctgaccacattccactgctgactgaa
tttgaagttgttgcagaccagtgctga
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