Corticium candelabrum: 134184248
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Entry
134184248 CDS
T11492
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
cclm Corticium candelabrum
Pathway
cclm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
134184248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclm03036
]
134184248
03400 DNA repair and recombination proteins [BR:
cclm03400
]
134184248
Chromosome and associated proteins [BR:
cclm03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
134184248
DNA repair and recombination proteins [BR:
cclm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
134184248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
134184248
NCBI-ProteinID:
XP_062507871
LinkDB
All DBs
Position
9:1130243..1135912
Genome browser
AA seq
1286 aa
AA seq
DB search
MSSQEEASSSRLPGFSVDSSLIPTVESSEELRELGVCAFAQETFEKGFIEQVDKALAEQE
AALREKRLRKDVRRILDQIRAVEVSLTQHSKLCQSLASQLVLTAEQKLQLVTARKQQSEK
RNELTELRKQEKLLFKALQEGKEIDDVSEAKGVNGESLTLEQEQMIQCGEMTPFGTVLSS
FTSETVQSNRQLEIPVAATTEKTVPGEEIVQEKSNISMFTSKTKKRNRTVDKGFHHVQHV
QDVGKDGDGDGDYVPNMSEYCESFYSSASDDSESTCEPDAKRRHQFEGQSRLKDRYQPRD
FSDDEDKYSSKRKLRRQTIRLSCQDDGNEELYKKRLRQYERKKERKLQRNQQQLEAAELD
DVDIAYSSDSLESDGCVMLQCLQEEDMVFEGGLKVPGPIWSKLYKYQKTGVKWLWELHGQ
QCGGILGDDMGLGKTIQVIAFLAGLQYGRVNTRITRRIGLGSVLVVCPATVMHQWVREFH
TWWPIFRVAVLHNTGSHVGSKKELVKRIALHPGVLVTTYSTLRSFRDSLLEHMWDYVILD
EGHIIRNPDSEITLACKQFRTPHRLILSGSPIQNNLRELWSLFDFIFPGKLGTLPVFMEQ
FSVPITMGGYANASTVQVQTAYRCACVLRDTISPYLLRRLKADVQMSLHLPSKNEQVLFC
QLTPEQIHQYKKFLSSEEVEMVMGQKHELQIFPALMTLRKICNHPDLASPEFYDLGGNAK
GSSDASKTSSRTAVLQSQSESSDKDYGFWKRSGKLVVVNSLLRLWKRQDHRVLIFTQTRQ
MLNIIEKYVQLKCYKYLRMDGAISVGSRQPLVKKFNQDSSIFLFLLTTRVGGLGINLVGA
DRVIIFDPDWNPSTDIQAQERAWRIGQRRNVTIYRLLTSGTIEEKIYHRQIFKQYLTNKI
LKNPSQRRFFKQNDLYELFTLSTADETQGTETSAIFAGTGSDVIVSSVRPKQLDCKKQRI
HNKSKDKVLEMIKRISQSLGKESNVEPLKESSKEQEHLSEKSKRKARKKAGSTLEGSYVD
GLERSAEYRLNDKEGVKEQRAEFDQYKTQEDYILHKLFKKSGLHSALQHDTIMEASSVDH
VLIESDANRVAQEAARALRQSRRQCLAAAAARGHVGTPTWTGNAGIVGGPKSTVRPRFGA
KRKSFHVSNADSTAVERTVEQNANSAHCSIVAQSAPSSANLLEEMRSRNAPLADVLNPPR
SEEDGGQSMQSLPTGEYDRLIDDIRMFVAFQCHVDGQATTQEILTNFAPRLKSRDSSVFR
AMLRQICDFERDDTRSGVWRLKADYR
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccaggaagaggcgagttcgtctcgcttgccagggttttctgtagattcttcc
ttgattcccactgtagagtcatcggaggagttaagggaattgggagtatgtgcattcgct
caggaaacatttgagaaagggttcatagaacaagtggacaaggcccttgctgagcaagag
gctgctctaagagaaaagaggctaaggaaagatgttagaagaattttagatcagattagg
gctgttgaagtatctctaactcaacacagcaaattatgtcagtcattagcttctcaacta
gttcttacagcagagcaaaagctgcaattggtcacagcaagaaagcaacagagtgaaaag
cggaatgagctaacggagctgcggaaacaggagaaattgctatttaaagctcttcaagaa
ggaaaagaaatcgatgatgtgtcagaggcaaaaggtgtcaatggcgagagtttaacgtta
gaacaagaacaaatgattcagtgtggcgagatgactccatttgggactgtcttgtcttct
tttacgtctgaaactgtacagtccaacaggcagttggaaattccagttgctgcaaccacg
gagaaaactgtacctggagaggaaattgtgcaagaaaagtcaaatattagtatgtttact
tcaaagacaaagaagaggaatcgtacagtggacaagggatttcatcacgttcaacatgtt
caagatgttggaaaagatggtgatggtgatggtgattatgttcctaatatgtctgagtat
tgtgaaagcttttattcaagtgccagcgatgatagcgagtctacctgtgagcctgatgca
aagagaagacatcaatttgaaggacaaagcagattaaaagacagataccaaccacgggac
ttttctgatgatgaagacaagtattcatctaaacggaaattaagaaggcagacaattaga
ctcagttgtcaagatgatggcaatgaggagctttataagaaaaggttgaggcaatatgaa
aggaaaaaggaaagaaagctgcaaagaaatcagcagcagcttgaggctgctgaattggat
gatgttgatatcgcctacagtagtgactctttagagagtgatggatgtgttatgttacaa
tgcctacaagaagaagacatggtttttgagggtggactgaaggttccaggaccaatatgg
tctaaactctacaaatatcagaaaacaggagttaaatggttatgggaactacacggtcaa
cagtgtgggggcatccttggtgatgatatgggactagggaaaacaattcaagtcattgcc
tttctggcaggtttgcagtatgggagagttaacacacgaataacaagaagaattggttta
ggttctgttcttgttgtctgtccagcaactgtgatgcaccagtgggtgagagaatttcat
acttggtggccaatatttagagttgctgttcttcacaatacaggctcgcatgtcggttcc
aagaaagagttagtgaaacgaattgctcttcacccaggtgtgcttgtgaccacatactct
actttgaggagctttagagatagcctgcttgagcatatgtgggattatgtaattctagat
gaaggtcacattattcgaaatccagactcagagataacacttgcttgtaaacagtttcga
acacctcacagactaatactttctggatcaccaatccaaaacaatttgcgagagctatgg
tcattgtttgactttatctttcctggcaaactgggcacacttcctgtatttatggagcag
ttttccgttcccataactatgggcggttatgctaatgcatcaacagttcaggttcaaaca
gcttatcggtgtgcttgtgttttacgagacacaattagtccatacttgttgagaaggttg
aaagcagatgttcagatgtcactccacttgccaagcaaaaatgaacaggtgttgttctgt
cagcttactcctgagcaaattcaccagtacaagaaatttttaagctcagaggaggtggaa
atggtgatgggacaaaagcatgaacttcagatatttcctgctctcatgacgttgcgtaag
atatgcaatcaccctgatctggcaagtcctgaattttatgatcttggtgggaatgcaaag
ggttctagtgatgcttcaaagacatctagtagaacagctgtgctgcagtcacaatcagag
tcgagtgacaaggattatggtttctggaagagatcaggcaaactagttgttgtaaactct
ttgttgagattgtggaaacgacaggatcaccgagtgcttatctttactcaaacgagacag
atgttgaatattattgagaagtatgtacagttgaaatgctacaagtaccttcgaatggat
ggtgcaatttctgttgggtctcgtcagccacttgtaaagaaatttaatcaggattcaagt
atctttctgtttcttctcactacacgtgttggagggctagggattaatttggttggtgca
gatcgtgtaattatttttgatcctgattggaatccaagtacagatattcaagctcaagag
cgagcctggcgtattggtcagaggagaaatgtaacaatatatcgcctgttaacatcagga
actattgaagagaagatataccatcgtcaaatctttaagcagtacttgactaataaaatt
ttaaagaatcccagtcaaaggcgcttcttcaaacaaaatgatctgtatgaattatttacc
ctctcaactgctgatgagacccaaggaactgagaccagcgccatctttgctggcactggc
tcagatgtgattgtttcatctgtaagaccaaagcagctagattgtaaaaaacaaagaata
cataacaaaagcaaagacaaagtgttggaaatgatcaagagaatatctcaatcgctagga
aaggaaagtaatgttgaacctcttaaagaatcatcaaaagaacaagaacatttgtctgaa
aagagtaaacgaaaagcaaggaagaaggccggatctactctagagggttcttatgttgat
ggtctggagcgctctgcagaatacagactgaacgacaaagagggagttaaggagcagaga
gctgagtttgaccaatacaagactcaagaggactatatcttgcacaaactgttcaagaag
tcaggtcttcacagtgctcttcaacatgataccataatggaagccagcagtgttgatcat
gtactgatagaaagtgatgcaaatcgtgttgctcaagaagcagccagagctctgagacag
tctcgtcgtcagtgtttagctgcagctgcagcccgtggtcatgtagggaccccaacgtgg
acaggtaacgctggaattgtaggaggaccaaaaagcaccgtcaggccaagattcggtgcc
aaaagaaagtcttttcatgtgagtaatgcagacagtacagctgtggaaagaactgttgag
caaaacgccaacagtgcgcattgctccatagttgctcagtcagcaccttcttctgctaat
ttgttggaagaaatgaggtcaaggaatgctcctcttgcggacgttcttaatcctcctagg
tctgaagaagatgggggtcaatccatgcagtctttacctactggtgaatatgaccgtctt
attgatgacattcgaatgtttgtagcatttcaatgtcatgtggatggtcaggcaactaca
caagaaatcttaactaactttgctcccaggttgaagagcagagactcttcagtttttcgg
gctatgctcagacagatatgtgacttcgagcgggatgatacgagaagtggtgtgtggaga
ctgaaagcagactacaggtag
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