Corticium candelabrum: 134185176
Help
Entry
134185176 CDS
T11492
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
cclm Corticium candelabrum
Pathway
cclm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134185176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134185176
03009 Ribosome biogenesis [BR:
cclm03009
]
134185176
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134185176
Ribosome biogenesis [BR:
cclm03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
134185176
Pre-60S particles
134185176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
IBN_N
TOR1L1_N
Vac14_Fab1_bd
TPR_IPO5
HEAT_2
Cnd1
Arm
HEAT_EF3_N
TPR_DNAAF5
HEAT_MROH2B_C
MMS19_C
PDS5
CLASP_N
CEP104-like_TOG
Adaptin_N
INTS7_N
Dopey_N
TPR_TTI1_C
UNC45-central
HEAT_MROH2B_1st
TAF6_C
HEAT_DAAF5
IFRD
Motif
Other DBs
NCBI-GeneID:
134185176
NCBI-ProteinID:
XP_062508940
LinkDB
All DBs
Position
10:4174745..4188800
Genome browser
AA seq
884 aa
AA seq
DB search
MAWQPDEAGLTQILQLLKESQSPVTEVQRAVQQKLESLNQYPDFNNYLVYVLTKLKSEDE
PTRSLSGLILKNNVKSYYQAFPEEVKGYVKSECLSAIGDPSPLIRATVGILVTTIVQKGK
LISWPDLLPLLCHLLDSGDYTVCEGAFGALQKICEDSADQLDSDALNRPLNTLIPKFLAF
FKHASAKIRSHAIACVNQFIITRTQALMVHITSFIENLFALSGDEDAEVRKNVCRAVVML
LEVRVDVLMPHIHNIVEYMLLRTQDTDEHVSLEACEFWLTIAEMPVCKEVLAPHLPSLVP
VLVRGMRYSELDIVLMKAEVEDETVPDRPEDMKPRFHKPKTHLHPHIEKEQEEDFDDDDD
TDVLSDWNLRKCSAAALDMLASVFRDDMLPTLLPILKEILFDPDWIAKESGILVLGAVAE
GCYTGIVPHLQELIPFLIASLAEKRALIRSITCWTLSRYSHWIVSQPHELYLQKLMEELL
KRILDSNKRVQEAACSAFATLEEEACTELVPYLSYILQTLVFAFKKYQHKNLLILYDAIG
TLADSVGNHLNQPEYIELLMPPLIEKWNNLQDEDKDLFPLLECLSSVATALQGGFLPYAT
PVFRRCVSLVEKNLTQSIVSVSNPDHYDPPEKDFMIVALDLLSGLAEGLEGAIESLVTES
NILELLYRCVQDPMAEVRQSSFALLGDLTKACFPHVKPVADRFVPVLARNLNPEFISVCN
NATWAIGEVAIQMREDMTQYISIVIPHLVAIINRQNTPKTLLENTAITIGRLGLVCPNEV
AQHLQQFIRPWCTSLRNIRDNEEKDSAFRGVCAMIVVNPSGVVQDFIFFCDAVASWVEPK
QDLKEMFFKILHGFKNQVGEDNWKCFSDQFPPLLRETLTSQYGV
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcagcccgacgaggctggattgacacagattctacaacttctcaaagaaagt
caaagtccggttactgaagtccagcgagcagtgcagcagaaattagagtcattgaaccag
tatcccgacttcaacaactacctagtgtacgtcctgacgaaacttaagagcgaagacgag
ccgacacgttctctgtcgggtcttatactgaagaacaacgtcaagtcgtattatcaggct
tttcccgaagaggtgaaggggtatgtgaagtctgaatgcctctctgcaataggcgaccct
tcgccactgataagagctaccgttggtattctggtgacgaccatcgtgcagaaaggaaag
ctcatcagctggccggacctgcttcctcttctctgtcatctcttggacagtggagactac
actgtttgtgagggagcatttggagcattgcagaagatatgtgaggactctgcagatcag
ctcgatagcgatgctctcaatagacctctgaacacacttattcccaagttcttggctttt
ttcaagcatgcgagtgcaaagatcagatcacatgcgattgcgtgcgtcaaccagttcatc
atcaccagaacgcaagcattaatggttcacattacttctttcattgagaatctgtttgct
ctgtcgggagacgaagatgccgaggttcgaaagaacgtctgtcgggcggtggtcatgtta
ctcgaagttcgagtggatgtgctcatgccacacatccacaacatcgttgagtacatgctg
ttgagaactcaggataccgatgaacacgtttccttggaggcgtgtgagttctggctgact
attgctgagatgccggtttgcaaggaggtccttgcccctcatctgccatcgctggtaccg
gttttggtgcgtggaatgcgatactcagaacttgatatcgttctgatgaaggcggaggtt
gaggatgaaacggttcctgataggccagaagatatgaaaccaaggttccacaagccgaag
acgcatctacatccacacattgaaaaggaacaagaagaagacttcgacgatgatgatgac
acggatgtcttgtcagattggaacctgaggaagtgttcagccgctgctcttgacatgcta
gccagtgtgttccgtgatgacatgttgccaacactcctccccattctgaaagagattctt
tttgatcctgactggatagcgaaagagtcaggaatccttgtgctaggagccgtagcagaa
ggttgttacactgggattgtgcctcatctgcaggaactgattcctttcttgattgcatca
ttagccgagaaacgagctcttattcgttccatcacttgttggacactgagtcgatactct
cactggatagttagtcaaccacacgagttatacttgcagaaactaatggaggagttgctg
aagagaatactggacagcaacaagagagtccaggaagcggcgtgcagtgcatttgccact
ttggaggaggaagcttgcactgagttggttccctatctttcgtatatcttgcagacactt
gtctttgctttcaagaagtaccagcacaagaatctattgatcttatacgatgcgatcggc
actctggctgactcagttggaaatcatcttaaccaaccagaatatattgagctattgatg
ccaccgttaatcgagaaatggaataacctgcaagatgaagacaaagatctctttcctctc
ctagagtgtttatcatcagtagcaactgctcttcagggtgggtttttgccttatgcaact
cctgtgtttcgtcgttgtgtcagcttggttgagaagaaccttactcaatcgattgtatct
gtgagcaacccagaccattatgatcctccagagaaggacttcatgattgtagctcttgat
ttgcttagtggattagctgaagggttagagggtgccatcgagagcttggtaacggagagc
aatattctggaacttctctatcgttgtgttcaggatcccatggcagaagttaggcagagc
tcatttgctctacttggtgacttaacgaaggcctgctttcctcatgtcaaaccagtagca
gatcggtttgtgcccgtgttagcgcggaatctcaacccagagttcatttcagtgtgcaac
aatgcaacgtgggcaattggcgaagtcgccattcaaatgcgtgaggacatgactcaatac
atttcgattgtaattcctcacttggttgccatcattaaccgacaaaatacacccaagact
ctgctggagaacacggcgatcactattggacggcttggtctggtgtgtccgaatgaagta
gcacagcatctccaacagtttatcaggccgtggtgtacgtcactgaggaacatcagagat
aatgaagagaaggattctgcgtttcgtggtgtctgtgccatgattgttgtcaatcctagc
ggagtggtccaggacttcatatttttctgcgatgccgtggcatcatgggtagaacccaag
caagatctaaaagaaatgtttttcaagattttgcatgggttcaagaatcaagttggtgaa
gacaactggaagtgtttctctgatcagtttcctccactgttacgagaaacgttgacgtct
cagtatggtgtgtga
DBGET
integrated database retrieval system
