Corticium candelabrum: 134185537
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Entry
134185537 CDS
T11492
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cclm Corticium candelabrum
Pathway
cclm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134185537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclm03021
]
134185537
03036 Chromosome and associated proteins [BR:
cclm03036
]
134185537
Transcription machinery [BR:
cclm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134185537
Chromosome and associated proteins [BR:
cclm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
134185537
Chromatin remodeling factors
BAF complex
134185537
PBAF complex
134185537
GBAF(ncBAF) complex
134185537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
BRK
ResIII
QLQ
DEAD
HDA2-3
NirdL-like_HTH
DUF7126
Motif
Other DBs
NCBI-GeneID:
134185537
NCBI-ProteinID:
XP_062509331
LinkDB
All DBs
Position
10:7571513..7590851
Genome browser
AA seq
1472 aa
AA seq
DB search
MADMMFNAQQTPHSQLPAYRAPLGYNSGPQAMNPPPSVVPQMQLTPDNIQRLRKAIETMQ
QKGMENDPRYFQLVQMAKAYRVPLPGNQQSIPPDNRVSLPRVGEASLSSQAPGTPQAPGS
MQSPGTPQGPGSLQASSLFNNDQLQQLRAQIMVYKLLGRNQAIPNHVLLAATAKPNRKLV
PPTGTSDVMQSVSDPDVGQLDRKDDISKVKMESEKEQEPPPPLSIEKQMLQSRVVDPKQL
LKSTQETPQTKLMQVAKLPGLDPTDIIKEREHRIQARVALRIQELESMPSTLPSDLRVKA
LIELRALRLLGFQKQLRKEILSCIRRDTMLETALNPGAYRRGKRQTVRDARYTEYLEKEQ
RKEHHRRRRQKHQEYLSSVIQHAKEFRDYHRGNQGRISKLNKSIMTWHANAEREQKKENE
RIEKERLRRLMAEDEEGYRRLIDQKKDRRLAYLLQQTDEYIASLVELVREHKKDVMLKTK
PVEKKIEVKKDEKRAVVFNSETGETLQGDAAPLLSEVEQWLADHPGFEVVEQKEVDEGQR
SEEQQTEAEEKEKEGVAVNERDEAKAVIERAKLADADIELQDEYVATDVTSDSTYYSIAH
SRIEPVTEQPSNLVCGTLKGYQLQGLEWLVSLFNNNLNGILADEMGLGKTIQTIALACYL
MEKKGVYGPFLVIVPLSTLSNWMMELDRWAPMIVKVAYKGAPSQRKNLHSILRNGRFNMV
VTTYEYIMKDKSVLSKVKWRLMVIDEGHRMKNHHSKLTQVINSYYVTSHRLLLTGTPLQN
NLPELWALLNFLLPTIFKSCTTFEQWFNAPFAQTGEKVELNEEETILIIRRLHKVLRPFL
LRRLKKEVESQLPEKTEYVIKCDMSALQRRVYQHMQKNGLLLTDGSEQKKGRGTTKALLN
TIMQLRKICNHPFMFKEVESSYSQHLGLAGSLVDGRQLYRVSGKFELLDRILPKLQVNNH
RVLCFCQMTQLMTVMEDYLNWAQIPYLRLDGGTKAEDRTELLAKFNAPNSPYFIFLLSTR
AGGLGLNLQTADTVVLFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEEKILAA
ARYKLNMDEKVIQAGMFDQKSTSSERKAFLEALIVIENDEDDQREENEVPDNETLNQMLA
RNEDEFELYQKMDADREEAADQSTDKVSRLVTEAELPAYLLKDDKEVERIAFEEEEERLF
AQGVRQRRDVKYTDLLTERQWLKAVEDGNLDEVLHKAKQRKRRRAYDPDEDEEDIRSAKR
QGRQPKSRPGSTLMRQLKKLLKMIIRHTDEYGRRLSDVFLKLPSSTELPHYYEVIKEPMD
FQCMKESVVAGKYESIDEMAEDMQLLCHNAQTYNVEGSQIYQDSLVLEAVFNNMKERVEQ
GLVSIDPESPSEFDDAGGEDIQSDSESNASLKLRIKIGKSDELMSEPKKKKKKRGRPPKS
TSRISSILPSDIDDSSRNTSCLASTENSDMDC
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatgatgttcaacgcgcagcaaactccacattcacaacttcccgcatatcgg
gcccccttaggatacaacagcggaccgcaagccatgaatcctccgccatccgtcgtaccg
caaatgcagctgactccagacaacatacagagattaagaaaggcaatcgaaacgatgcag
cagaaaggcatggaaaacgatccgcgatattttcagctcgttcagatggctaaagcctat
agagtccctctaccgggcaaccaacagtccataccaccagacaatcgagtatccctaccc
cgggtgggtgaggcaagtctctccagtcaagctcccggaactcctcaagctcccggaagt
atgcaaagtcccggaacacctcaaggtcccggatctctgcaggcttcctcccttttcaac
aacgaccagttgcagcagttgagagcgcagatcatggtgtataaacttctcggtcgcaat
caagcgattcctaatcacgtcctacttgccgcaacggcgaaacctaaccgaaagttggtg
ccaccgactgggacctctgatgtcatgcagagtgtgagtgacccggatgttggacagttg
gatcgtaaggatgatatttcgaaagtaaaaatggagagtgagaaggagcaggagccacca
ccgccgttgagtattgagaagcaaatgctgcagagtcgggtggtcgacccgaagcagttg
ttgaaatcaacccaggagacgcctcagactaagttgatgcaggttgcaaaactgccgggt
cttgatccaacggatattattaaagagagagaacacagaattcaagctcgtgttgctctt
cgcattcaagagttggagtccatgccatccactctaccaagtgatcttcgtgttaaagct
ctaatcgaactacgagccctcaggctgctcggcttccaaaaacagctacggaaggaaata
ctttcatgtatacgtagagatacgatgctcgagactgctcttaatccgggagcatataga
agaggaaagagacagacagtgagggatgctagatacactgaatacttagagaaggagcaa
agaaaggagcatcatcgacgacgaagacagaagcatcaggaatatctcagcagtgttata
caacacgccaaagagttccgagactatcaccgtggcaaccagggcaggatcagcaaactg
aacaaatcgatcatgacgtggcacgccaacgctgaacgtgagcagaagaaggaaaacgaa
cgaatagagaaagagagactgcgacgtctcatggctgaagacgaagaaggatatcgtcga
ctcattgaccaaaagaaagacagacgactggcgtatctgctgcagcagacggatgagtat
attgcgagtctggtggagctggtgagggagcacaagaaggatgttatgttgaagacaaag
ccggtggagaaaaaaattgaagttaagaaagatgagaagcgagctgttgtattcaattca
gaaactggtgaaacattgcaaggagacgcggcccccttgctgtcagaagtggaacagtgg
cttgcagaccatccagggtttgaggtagttgaacagaaggaagtagatgaagggcaaagg
tcagaggagcagcagacggaggctgaggaaaaggaaaaggaaggagtcgctgtgaacgag
agagatgaggcgaaagctgtaattgagagagcaaagcttgctgatgctgacattgaactc
caagacgaatacgtagcaacagatgtcaccagtgacagcacctactacagcattgcacac
agcagaatagaacccgtcactgagcagccatccaacctcgtttgtggcacactcaagggt
tatcaactgcagggactggagtggcttgtttcgcttttcaacaacaaccttaatggaatt
ctggcggatgaaatgggcttggggaagacgatacagacgattgcgcttgcgtgttatttg
atggagaagaagggagtgtatggaccgttcttggttatcgttcctctctcgacgctttcg
aattggatgatggagttggatcgttgggctccaatgatagtgaaagttgcttataagggt
gcacccagtcaacgtaagaacctccacagcatcctgaggaacggccgtttcaacatggtc
gtaacaacatacgaatacatcatgaaggacaagtccgttctgtctaaagtgaagtggagg
ttgatggtgattgatgagggtcatcgtatgaagaatcatcactcgaaactgacacaagtg
atcaattcgtactacgtgacgtcacatcgtttgctgttgacgggaactccacttcagaac
aatctccctgaactgtgggcattactgaactttctcctaccaacaatattcaagtcatgc
acaacgttcgagcagtggtttaacgcaccatttgcccagacaggagaaaaggtcgaacta
aacgaggaagaaaccattttgatcattcgtcgtcttcacaaggtattgaggccttttctt
ttgagacgactgaagaaggaggttgagtcacagctgcctgagaaaacggagtatgtgatt
aagtgtgatatgtcggctctacagcgacgtgtgtatcagcacatgcagaagaatgggttg
ttgttgactgatggatctgaacagaagaagggacgtggtacaactaaggcattgctgaac
acgatcatgcagctgaggaagatctgtaatcatccgttcatgttcaaagaggtggagtca
tcgtacagtcagcacttgggactcgcaggatctttggttgatggacgtcagctctacaga
gtgtccggcaagttcgagctgctcgatcgcatcctcccaaaactccaagtcaacaatcac
cgcgtgctctgcttttgtcaaatgacgcaactcatgacagtcatggaagactacctcaac
tgggcacagattccatatcttcgtttagacggaggaacaaaggccgaagacagaacggaa
ctgcttgccaaatttaatgccccaaactcgccgtatttcatcttcctgttgagcacacga
gccggtggattgggattgaacttgcagacggcagacacagttgtgctgttcgactcggat
tggaatccacatcaggacctgcaggcgcaggatcgtgctcatcgtattggacagaagaat
gaggttcgtgtgttgaggttgatgacggtgaacagcgtggaggagaagatcttggctgca
gcgagatacaaactgaatatggatgaaaaggttattcaagctggaatgtttgatcagaag
tcgacatcgtctgaacgaaaagcatttcttgaggctttaattgtgattgagaacgacgaa
gacgaccagagagaagagaacgaagttcccgataatgaaactctcaaccaaatgttggca
aggaatgaagatgagtttgaactttatcagaaaatggatgctgatcgagaagaagcagct
gatcaatcaacagacaaagtatcccgactggtcacagaagctgagctacctgcatatctt
ttgaaagatgacaaagaggtcgagcgtatagcctttgaggaggaggaagaacgactgttt
gcacaaggtgtccgacaaagacgagacgttaagtacacagatcttttgactgagagacaa
tggctgaaggctgttgaagatggtaatctcgacgaggtgcttcacaaagcaaaacaacgt
aaacgacgacgagcatacgatccagacgaagacgaagaagacattcgatcagcaaagaga
caaggaagacaaccaaagagtcgtccgggtagcacattgatgcgacagctcaagaagcta
ctcaaaatgattattcgccatactgatgagtatggacgtcgtttgagtgacgtttttctc
aaactgccgtccagcacggagctgcctcattactacgaggtgatcaaagagccaatggac
tttcaatgcatgaaggagagcgtcgttgcaggcaagtacgagagcattgatgagatggca
gaggacatgcagctgctgtgtcataatgcacagacgtacaacgtggaaggctcgcagatc
tatcaagactcactcgttctagaggctgttttcaataacatgaaggaacgtgtggaacaa
ggccttgtttccatcgatccagaatcgccatcagaatttgatgacgctggtggagaggac
atacagtcggatagtgaatcaaatgcgtcattgaagttgaggataaagattggaaagtca
gacgagttgatgtctgagccaaagaaaaagaagaaaaagcgtggacggccaccaaaatct
acatccaggatatcatccatattaccaagtgatatcgacgattccagtcgcaacaccagc
tgtctcgcatcgacagagaacagcgacatggactgttaa
DBGET
integrated database retrieval system
