Corticium candelabrum: 134188078
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Entry
134188078 CDS
T11492
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-like
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
cclm Corticium candelabrum
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclm03016
]
134188078
Enzymes [BR:
cclm01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
134188078
Transfer RNA biogenesis [BR:
cclm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
134188078
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Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
134188078
NCBI-ProteinID:
XP_062512250
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Position
1:complement(14227505..14228955)
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AA seq
479 aa
AA seq
DB search
MANSLQRPKRKRCSKPLDEPFPVPIQSLTGKEVDSSRWFRYEGKLVSNFVCVTKPGDMNM
LYKMGFFGKGMLSKSKPGRDEQLRIFQKKRKRLPDDVRRLILTDIRSRNCVRRKRRREWT
EMSGITMPQEEDAVQVDAIPSDASVSDEEQIGMRTPETVHDDMSGNTSCKKEDQTSHIFS
EFRELPDTITGTRVEGTDDKDKSNVSLSVSTPFMQLQTGNSTGKGEDVQIQNTVSCRTEL
EVDTTSAKSNCDSSFKMQRGQMDEVTKLESVKLESVKLESKPKEKSSEYPVTEFLQLSLC
EAFFLSYGLGCLTVHRSDGSPLTITQLWQACLQAQPGFLALYVAYHHLRSKGWVVRTGEK
YGVDFLIYKDGPMFHHSNAAILVQTVDKDTLQPVYDPAIPSIPFTWQYLAGINRINGAVG
KDLILFHVLKPSGLTDDDLSSPVCIRQMSVQEIVLRRWIPDRSREVHDHSNNQAETSLE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagcctacagagacctaaacgcaagcgatgttcaaaaccgttggacgagcca
tttccggtgcccattcaatcgctgactggaaaggaggtagattctagcagatggtttaga
tatgagggaaaactcgtctcaaactttgtttgcgtgacgaaaccgggagatatgaatatg
ttgtataagatgggattttttggaaagggcatgctatcgaaaagcaagcctggaagggac
gagcaactgagaatttttcagaaaaaaaggaagcgacttcctgatgatgtgagaagatta
atattgactgacatccgctctaggaattgcgtgagaagaaaacggcgcagggagtggacg
gaaatgtcgggtattaccatgcctcaagaggaagatgcagtgcaagtggatgctatccca
tcagacgcatctgtaagtgatgaagaacaaattggtatgagaacacctgaaacagttcat
gatgatatgtcaggcaatactagttgtaaaaaggaagatcaaacatctcacattttttct
gaattccgtgaattacctgatacaataacaggaacacgtgttgagggcacagatgataaa
gacaagtctaatgtgagtctcagcgttagcacaccttttatgcaactgcaaactggtaac
tctactggtaaaggggaggatgtacaaatacagaacacagtctcttgcaggactgaatta
gaagttgacacaacgtctgccaaatcaaattgtgacagttcattcaaaatgcaacgaggg
cagatggatgaagtgactaaacttgaatcggtcaaacttgaatcggtcaaactagaatct
aagccaaaggaaaagtcaagtgaatacccagtgacagagtttctgcagcttagtttatgt
gaggcatttttcttatcgtatggattgggttgtctcactgtgcacagatcagatggttca
ccattgacaatcactcagctatggcaggcttgtctacaagcccagcctggttttcttgca
ttgtatgtggcatatcaccacttgcgaagtaaaggatgggttgtgagaactggagaaaag
tatggtgtagattttctcatctataaagatggtccaatgtttcatcactcaaatgctgcc
attttggtacagacagtggacaaagacactctacagccagtctatgatccagccattcct
tcaattccctttacgtggcagtatctggctggaataaatcgtatcaatggagctgtaggg
aaggacttgattctctttcatgttttgaaaccgtcaggattgactgatgacgatttgtca
tcacctgtctgcattagacaaatgtcagtgcaggagattgtactaagaagatggatacca
gacagaagtcgggaggtgcacgatcattccaacaatcaagctgaaacatcgttagaatga
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