Corticium candelabrum: 134189717
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Entry
134189717 CDS
T11492
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cclm Corticium candelabrum
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclm03009
]
134189717
Enzymes [BR:
cclm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134189717
Ribosome biogenesis [BR:
cclm03009
]
Eukaryotic type
Pre-60S particles
Helicases
134189717
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GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
SBF_like
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134189717
NCBI-ProteinID:
XP_062514062
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All DBs
Position
14:4723094..4725105
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AA seq
593 aa
AA seq
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MAEPVVDWLSLSPALSASVLRTIDRMGFKSMTPVQSACIPLFMSYKDVVAEAVTGSGKTL
AFVVPLLEILLRRETPLGKRSIGAIIVSPTRELATQTFDVLNDFITDIQCFSSLLTIGGG
DPTVDLNKFREHGGNILVATPGRLEDMLKRSNRGDCGVNLAWCVKELDVLVLDEADRLLD
MGFETSINTILSYLPKQRQTGLFSATQTSEIEALIRAGLRNPVRVTLREKSSLENVSQRT
PTTLKNFYLVCPANQKFSNLVAFVKKHRGEKVMVFMSTCACVEYFAKALNCILKEKMDVL
AIHGKMRSKRQKIFARFKSMGSGLLLCTDVMGRGVDIPTVHWVVQYDPPSSATSFVHRCG
RTARIGNEGNALLFLMPNEESYIPFLSLNQKVPVEEFCDDLPQPVPNMVEKLRKLALRDR
DILEKGTRAFVSYVQSYNKHECRLIFDVKELDFGLLATGFGLLRMPKMPELKGKIVETFM
SSDIDLESVAYKDKTREKQRLERKRKNEAGEKTETSRKRKKSATVAWSKQKDKKTAKAKK
KLQHEKIQQKKNNAALFSEKDWDELSNEIRLLKKLKSGKITKEQFDELVNDEI
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcctgtagttgactggttgagtctttctcctgctctctctgcctctgtgctt
cgaacgatcgataggatgggtttcaagagcatgactcccgtgcaatccgcgtgtattcct
ctcttcatgtcttacaaggacgtcgttgccgaggctgtaacaggctcgggcaaaacgttg
gctttcgtcgtgcctctactagaaatcctactcagacgtgaaacgccactcggcaagaga
agtataggagcaatcatagtgtcaccgactcgagaactagccacgcaaacgttcgacgtc
ctcaatgatttcatcacggacattcaatgtttctcgagtctgctgaccatcggtggcggc
gacccgactgtcgatttgaacaagtttcgtgagcacggtggaaacattctcgttgctact
cccggtcgtctcgaggacatgctcaaacgcagcaatcgaggtgattgtggcgtcaacttg
gcttggtgtgtcaaagaattggatgtgctcgtcttagatgaagcggatcgtttgctagat
atgggatttgaaacttctattaacactattctaagttatctaccaaagcagagacaaacc
ggcctcttctctgcgacgcagacttcggaaatcgaggctctcattcgagctgggttgagg
aatcctgttcgagtgacgttaagggaaaagagcagtttagaaaacgtatcgcaaaggact
cctacaacactgaagaacttctatcttgtttgtcccgccaatcagaagttctctaacctt
gttgcgtttgtaaagaaacatcgaggagagaaggtcatggtgtttatgagtacgtgtgct
tgtgtcgaatactttgctaaggccctgaattgcatcttgaaggaaaaaatggatgtgctg
gctattcatggtaagatgagatcgaaacgtcaaaagatatttgctcggttcaaatccatg
ggttccggcctgttgctctgtacagatgtgatgggtcgtggagttgatattccgactgtc
cactgggttgtgcagtatgatccaccgagtagtgcgacatcattcgtccatagatgtgga
cggactgctcgcattggaaatgaaggcaatgcattgttatttcttatgcccaatgaggaa
tcgtacattcccttcctgtcacttaatcagaaagttccagttgaggaattctgtgacgac
cttccccaacctgttcccaatatggtggagaaacttcgtaagctggcattgagagatcga
gacattcttgagaagggaacaagagcttttgtttcatatgtccaatcatacaacaaacat
gaatgccggttaatatttgatgtcaaggagctggattttggtttacttgctacaggattc
ggtcttctgcgcatgcccaagatgccagaactaaaaggcaaaatagttgagacttttatg
tcatctgatattgacttggaatcggttgcctataaagacaagactcgtgaaaagcaacga
ctggaaaggaagaggaaaaacgaagctggagaaaaaaccgagaccagtagaaagagaaag
aaatcagctaccgtggcatggtctaaacagaaggacaagaaaactgcaaaagcaaagaaa
aaattacagcacgagaagatccagcagaagaagaacaatgcagccctctttagcgagaag
gactgggacgaattaagcaacgagatcaggttgttaaagaaactgaaatccggcaagatc
acaaaagagcagtttgatgagctagtaaacgatgagatatga
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