Corticium candelabrum: 134189748
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Entry
134189748 CDS
T11492
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cclm Corticium candelabrum
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclm03009
]
134189748
Enzymes [BR:
cclm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134189748
Ribosome biogenesis [BR:
cclm03009
]
Eukaryotic type
90S particles
Helicases
134189748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
134189748
NCBI-ProteinID:
XP_062514099
LinkDB
All DBs
Position
14:complement(4918554..4928161)
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AA seq
657 aa
AA seq
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MADCFDLFRRLRAGAVFDKTRFCEHINIAEGLAVGQKRDRKGKTQDDIEKSLDFFSERVL
SGASDVKTAKTNSRKKRDVETVAAVELEKPKEIVADRRGTKRKTNESVTKTSRKNRKTHD
KEQENACSDMESLQQMEVTEPKIFSDSVVAQSENKLDKKKSRQKKRKITAEMQKKLEMAN
AFRNEHHIYIKGADVPEPITSFHQLQDVYSVQSYVLKNVIESGYFEPTPIQMQAIPLMMH
KREILGCAPTGSGKTAAFLLPIFVHLKKPQKQGFRALIVSPTRELAQQIYRESCRLANGS
GFRIHVLTKAKASANNFNEQSSQRFDILVSTPNRLVHLLEQDPPGICLSQVEWLILDEAD
KLFEDGKDGFRDQVATIFSVCDKIDVCRGLFSATLSNGIEEWCHAHLDNHVRVIVGQRCF
GCHSALFVLTVSVCRNAATETVKQRLVFVGEEGGKLIAIRDIIREGFRPPMLVFVQSKER
AKDLFHELIYDGLNVDVIHADRTQAQRDNVVRCFRVGKVWILICTELMGRGIDFKGVSMV
VNYDFPTSAVSYIHRIGRTGRAGHVGEAITFFTKEDLGNLRSIVNVMRSSGCEVPQWMLE
LKKPGKKKRRQLAKKPVERLTIKTASKYDIQMAKKKMELIAASKRRKKALSASVCDN
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggattgttttgatttgtttcgacgtttgcgagctggtgcagtttttgacaagact
cgattttgcgagcacattaatatagctgagggacttgcagtaggacagaaaagggacaga
aaagggaaaactcaagacgatatagagaaatcactagactttttcagcgaaagggtttta
tcaggcgcaagtgatgtgaaaacagcaaagaccaattcaaggaagaagagagatgttgag
acagtggctgctgtcgagttagagaaaccgaaggaaattgtagcagacagaagaggcaca
aagagaaagactaatgaaagtgtgacgaaaacaagtagaaagaatcgaaaaacacatgac
aaagagcaagagaatgcttgttctgatatggagtcactacagcagatggaggtgactgag
ccaaaaatattttccgatagtgtggttgctcagagtgagaacaaacttgacaaaaagaaa
tcaagacagaagaaaaggaaaataacagcggaaatgcagaagaagctggaaatggcgaat
gcatttcgaaacgagcatcatatttatataaagggggctgatgttccagagcctatcact
agttttcatcagcttcaagacgtatactcagttcaatcatatgtattgaagaatgtcatt
gaatctggctactttgagccaacaccaattcagatgcaagctataccattgatgatgcat
aaacgagagatattggggtgtgctcctactggttctggtaaaactgctgcatttcttctt
cctatatttgttcatctgaagaaaccacaaaaacaagggtttagagcactgattgtgtca
ccaacgagagagctggcacaacagatatatcgtgagagttgtcgtcttgctaatgggtct
ggctttcgcattcatgttctaacgaaggctaaagcatccgccaacaacttcaatgaacag
tcatcccaacgatttgatattctcgtttcaactcctaatcgacttgtacatctattggaa
caagatccacctggtatttgtttgtcacaagttgaatggctaatcttagatgaagctgac
aaattgtttgaggatggcaaagatggtttcagagatcaggttgctacaatattttcagtg
tgcgacaagattgatgtttgtcgtggcttgttcagtgccacattgtctaatggcatcgag
gagtggtgccatgctcacctggataaccatgttcgtgtcattgttggacaaaggtgcttc
ggttgtcattcggcattgtttgtattaactgtatctgtttgcaggaatgctgcaactgag
actgtgaagcagaggctggtgtttgttggagaagaaggtggcaaattgattgcaatacga
gatattatacgcgaggggtttcgacctccaatgttagtgtttgtacaatcgaaagaaaga
gctaaagatctatttcatgaactgatctatgacggtctcaatgttgatgtaattcatgcc
gatcgtactcaagcacagagggataatgttgttcgctgttttcgtgttggcaaggtgtgg
attctcatttgcactgaattaatgggccgtggtattgacttcaaaggtgttagtatggtt
gtcaactatgactttcctacatcagcagtcagctacattcacagaataggtcgaactggc
agggctggccatgtaggtgaagcaatcacgttttttactaaagaggatttggggaatctt
cgaagtatagtgaacgtcatgcgcagctcaggatgcgaagtgccacagtggatgcttgaa
ttgaaaaagcctggaaagaagaagcgcagacagttggcaaagaagcccgttgaacggctc
acaatcaaaacggcatccaaatatgacattcagatggcgaaaaagaaaatggaactaatt
gctgcatccaaacgtcggaaaaaggcattaagtgcatctgtatgtgacaattag
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