Corticium candelabrum: 134191933
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Entry
134191933 CDS
T11492
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
cclm Corticium candelabrum
Pathway
cclm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134191933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134191933
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134191933
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
134191933
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
134191933
NCBI-ProteinID:
XP_062516565
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All DBs
Position
16:2094675..2096625
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AA seq
189 aa
AA seq
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MEGVAVPGERLGSTEDFTSGGGTYECDGYVYASVTGFVKKQASQKVGQPPTVRIVRNESQ
HLVLPEIGSTVTCKVTSINSNVCKASIICVGPVHVKDPFRGIIRKDDVRATEKDKVEMYK
CFRPGDIIRAKVISLGDAQSYIMSTAENELGVIFAESEAGAAMIPVSWCHMQCPKTKVKE
NRKVAKVHN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtggcggttcctggtgagcgtcttggttctacggaggacttcacttctggt
ggtgggacttacgaatgcgatggatatgtgtatgcgtctgtaacaggatttgttaagaag
caggcgtctcaaaaggttggccagcctcccactgtaaggattgtgcgaaacgagagtcag
cacttggtgttgccagagattggctctacagtgacatgcaaggtcacctctatcaacagt
aacgtctgcaaggcatctatcatctgtgtgggaccggttcatgtcaaggacccgtttaga
ggaataatcaggaaggatgatgtaagagcaacagaaaaagataaagttgagatgtacaag
tgttttcgacctggagatataatcagagctaaagtgatctcattaggcgacgcccaatct
tacattatgtcaacagcagagaacgagctgggggttatatttgcagagagtgaagctggg
gcggccatgataccagtcagctggtgccacatgcagtgtcccaagacaaaagtaaaggaa
aacaggaaagtcgctaaagtgcataactga
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