Corticium candelabrum: 134192316
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Entry
134192316 CDS
T11492
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cclm Corticium candelabrum
Pathway
cclm04140
Autophagy - animal
cclm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134192316
04148 Efferocytosis
134192316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclm04131
]
134192316
Membrane trafficking [BR:
cclm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134192316
Hops complex
134192316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_11
zf-RING_Vps41
zf-RING_5
zf-RING_16
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf_RING_Vps8_fungal
Tricorn_2nd
DUF2175
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
134192316
NCBI-ProteinID:
XP_062517021
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All DBs
Position
16:complement(1438582..1451402)
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AA seq
1015 aa
AA seq
DB search
MSSLFEQYEAASTSRPSRPPPLSTRSRIDPTLTEDPIVSSGFVDTRKGDDTPIFKRRQID
FRPRHMVGQVVVGNGQLVLAYANKNVVLRLDMETTREEELVVGKRADDIIHKLFIDPTGR
HIVVSMESNENYYVSRDSSKFKVLSKARGTMIESIAWNKTRMDEASTREILVGSSKGVIF
EAQIKPEEGRLLREADILKEWRQLSMLNRDEPEPVTGLRFEQFPHSASGEKKYYVMATTY
SRLYQFIGFVTTQEPPIFQWLFSYYETEPVGFTELPLNPGFQPTGELFFVYPKGKLLPNA
FAWLTGPGVYYGSLEFKNQSYTESVALNCRLLPYQKRSSTEQSLKSVGKEADVPAVSVLL
TDFHVLVAYNDRLQAVCILNDEPVHNEFFDTRRFGGLRGLCVDQMKGNILAYSDRAVFRY
RVHNESRDVWKMYLQKGEYQRAKQYCRENEAHLDQVETAHAQHLFEEKKFEVSAGLFAKT
QKSFEEVALMFIGIDQQEPLKTYLIKKLENLKTQDKTQVTMITSWLMEIYLNQLGNLKDE
GAPKEREHRMLRDEFRDFLKRPRVMTCLDENKHVAYELLTSHGDVEDLVFFAQEMQDYER
VVNHYLQQQNYAEALDALTRQKDIELYYKFSPVLIQHVPREIVNAWISMRNHLDPKRLIP
ALVQYEQTGDVAPHHNEALRYLKFCVDQLGNEDEAIHNYLLSLYAKAEDEMALLGFINSS
TQGDSEPNFDTKYALRLCAEHKKRKACVHLYSSMGLFEEAVQLALEDDDVELARINANKP
DEGDETLRKKLWLMIARFVIEQSGDVGRAMELLNECDLLKIEDVLQFFSDFVTIDHFKDA
ICTSLQEYNEHIESLKREMQEATDSGEMIRQDIQEMRNKYQVVAAQQKCSICSFPLLTRE
FYVFPCSHVFHADCLVVEIRPHLSQRQVNRMTDLHKQLGISFGRGFTASGSASASAAASE
ASDDLAAPTVSEQARADLDDLIASECPYCGDFMIRTIDLPFIPPEEYEQAVTSWL
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccttttcgagcaatacgaagcggcctccacttctcgtccatcgcgacctcct
ccattatcaacacgaagtcgcatcgatccaaccctaacagaagacccaatcgtctccagc
ggattcgtagacacgaggaaaggcgatgatacgccgatatttaagcggagacagatagat
tttagaccgaggcacatggtgggtcaggtggtggtggggaatgggcagttggtgttggct
tatgcgaataagaatgtggtgttgaggttggatatggagacgacaagagaagaagagctt
gttgttggtaagagagccgacgatatcatccacaagctcttcattgacccaacaggtcgt
cacattgttgtgagtatggaatcgaacgagaactactacgtgagtcgcgactcgtcgaaa
ttcaaagttctcagcaaagccagagggacgatgattgagtcaatagcttggaataagacg
cggatggatgaggcatctacgagagagatattagtggggtcaagtaagggagttatattt
gaagctcaaatcaagccggaagaaggtaggctgttgagggaagctgatatattgaaggaa
tggcggcagctttctatgttgaatcgtgatgagccagagccggtgactggactgcgtttc
gaacagtttcctcacagtgcatcaggagaaaagaaatattatgtcatggcaaccacatac
agtcgtttatatcaatttattggcttcgtgacaactcaagagccgccaatatttcaatgg
cttttcagttactatgaaacagaacccgttggattcacggaattgccgttgaatcccggt
tttcagccaaccggtgagctcttctttgtctacccaaaagggaaattgctgccaaatgca
tttgcttggctaacaggtcctggtgtctactatggttctctcgagttcaaaaaccagtcg
tacacagagtcagtggctttgaactgtcgtttgttgccgtatcagaaacgttcatcgact
gaacagtcactgaagtctgttggcaaagaagctgatgttcctgcagtttcggttttgctg
acagactttcatgttttagtggcgtacaatgacaggcttcaagcagtctgtatactgaat
gacgaacctgtgcacaacgagttctttgacactcgacgttttggtggattgcgtggtctc
tgtgttgatcaaatgaaaggcaacattctggcatactcagacagggccgtgtttcgttat
cgtgtgcacaacgagtcacgtgacgtgtggaagatgtatttacagaagggcgagtatcag
agagcgaaacagtattgtagagagaacgaggcacacttggatcaagtggagacggcacac
gcacagcatttgtttgaagagaaaaagtttgaagtgtcggcaggattgtttgcaaaaact
caaaagtcatttgaggaggttgcattgatgtttattggtatcgatcagcaggaaccactt
aagacgtatcttattaagaagttggagaatttgaagacgcaggacaaaactcaggtgaca
atgataacatcgtggctgatggaaatatacctcaatcagttgggcaacctaaaagatgaa
ggcgcaccgaaagaacgagagcaccgcatgctgagagacgaatttcgagatttcctgaag
agaccacgagtgatgacgtgtttggatgagaacaagcatgttgcatatgagctactcact
agccatggagacgttgaagatctcgtcttctttgcccaggaaatgcaagattatgagcgt
gttgttaatcactatttgcagcagcagaattacgctgaggcattggatgctttgacacgt
cagaaagatatcgaattgtattacaagttcagtcctgttctcatccagcatgtaccacga
gagattgttaatgcgtggattagtatgaggaatcacctcgatccaaagagactcatccct
gctcttgttcagtatgaacaaactggagatgtcgcacctcatcataacgaagctcttcgt
tatttgaaattttgtgttgatcaactgggtaacgaggacgaagccatccacaactacctt
ctgtctctctacgcgaaagccgaggatgaaatggcattgctagggttcatcaacagcagc
acacagggtgattctgagccaaacttcgatacaaagtatgctcttcgtctttgtgctgaa
cacaagaagcgtaaagcgtgtgttcacctctattcttctatgggtctgtttgaggaagcc
gtacagcttgcacttgaagatgacgacgttgaattggctcgcatcaatgccaacaagcct
gacgaaggagacgaaacgttgagaaagaaactgtggctgatgattgcaaggtttgtgatt
gagcagagtggagacgttggaagggctatggagttgttgaatgaatgcgacttgctcaag
attgaagacgtacttcagttcttctcggattttgttacaattgatcactttaaagatgcc
atctgcacatcattgcaagagtacaacgaacacattgagagtctcaagagagaaatgcaa
gaggcaactgacagtggagagatgattaggcaagacatacaagagatgagaaacaagtat
caagtggtcgctgcacagcaaaagtgttccatctgttcattcccactcttgacccgcgaa
ttctatgtcttcccgtgctcccacgttttccacgctgactgcctggtcgtagaaatacgt
ccacacctctcacagagacaagtaaaccggatgaccgacttacataaacaactaggaata
tcgtttggccgtggtttcactgcatctggaagtgcaagtgcaagtgcggctgctagcgaa
gcaagtgatgatcttgctgctccgacagttagtgagcaagcgagggctgatttggatgac
ctcattgccagcgagtgtccctactgtggcgacttcatgataaggaccatcgatttgcca
ttcattccacccgaagagtatgaacaggcggtcaccagttggctttga
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