Corticium candelabrum: 134193103
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Entry
134193103 CDS
T11492
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
cclm
Corticium candelabrum
Pathway
cclm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134193103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclm03041
]
134193103
Enzymes [BR:
cclm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134193103
Spliceosome [BR:
cclm03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
134193103
Complex B
134193103
Complex C
U2 SnRNP specific factors
134193103
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134193103
NCBI-ProteinID:
XP_062517875
LinkDB
All DBs
Position
17:complement(6396235..6403778)
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AA seq
750 aa
AA seq
DB search
MEGFKGFKVADSRKRAAIEDELDAEMFLQRKRISQKNTDGEEDYFNDDDDQQTGTGEKNS
GADDSDEEDPLDAFMAQMEAGEKKKNEKKREKQQKQEQKAQRQDIEDEDDQESYFKYVET
AMVPYADDEEAEDVEYDMDGNPIYRRPRIIEPLSPIDHSEIDYQEFEKCFYAEHEEITAL
SIHQMLDIRKKLSIKVNGADPKKPCISFAHFGFDDNLMKAIRKSEFTTPTPIQAQAIPIA
LSGRDVIGIAKTGSGKTVAYLWPLLVHIMDQPEIKEGDGPIGLICAPTRELCQQIFFEAK
KYGKAYGLRACAVYGGGSKWEQTKALKEWPEIVVATPGRLIDHVKSKTTDLKRVTYLVFD
EADRMFDMGFEPQVRSIANHVRPDRQTMLFSATFKKKVERLARDALTDPIRVVIGELGEA
SEDVTQHVHIFATREEKWPWVKKNLVQYLSSGSVLIFVTKKADSETLAASLRSNDFELGL
LHGDMDQNSRDEIITKFRRKQLAILVATDVASRGLDIQHIKTVINYDIARDITTHTHRIG
RTGRAGEKGVAHTLLTNKDVHFAGDLVRNMEQANQAVPSSLLDLAMQNPRFKKTRFNRGG
GGGRRAGIGRGRGGPGLGYSSSASSAGGRARPGFVGFSQGENLSSKSSGTSPVKKATGTS
GYVAFSKGDSLSSVAGTKSSDSASSAAPGPMSAGGGRSALLKAAFAAKYSRFQRSSDSTS
SQTMSTSGEGAVPPQQPAKPEGKKRRSRWD
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggaaggatttaaaggtttcaaggtcgcggatagtcgcaagagagcagcaattgaagac
gagctagatgcggaaatgtttctgcagaggaagagaatcagccagaaaaatacagacggc
gaagaagactactttaatgatgatgatgatcagcaaacagggacaggagagaagaattct
ggtgctgatgacagcgacgaagaagatccactggatgcatttatggcacagatggaagct
ggtgaaaagaaaaagaatgagaagaaacgtgagaagcaacagaagcaggaacaaaaagca
cagcggcaagacatagaggatgaagatgatcaggagtcgtactttaaatatgtggagaca
gcaatggttccctatgctgacgatgaagaagcagaggatgtagagtatgatatggatggt
aacccaatatacagaagaccaagaattattgaacctctttcaccaattgaccactcagag
atcgattatcaagagtttgagaagtgtttttatgcagagcatgaggagatcacagctttg
tctatacatcaaatgcttgacattaggaagaaacttagcatcaaggtaaatggagcagac
cctaagaaaccatgcattagttttgcacattttggatttgatgacaacttgatgaaagcc
attagaaaatcggaatttacaactccaacacctatacaagctcaggccattcctattgca
ttatctggtcgtgatgttattgggattgcaaaaacaggatcaggaaagacagtggcatac
ctctggccattgctagtgcacattatggatcaaccggaaatcaaggagggagatggtccc
attggtttgatttgtgctccaacacgagagctgtgtcaacaaatcttttttgaagcaaag
aaatatgggaaggcatatggactaagggcgtgtgcagtttatggtggaggcagcaagtgg
gaacagacaaaagccttgaaggagtggcctgagattgttgtagctacacctggtcgacta
attgatcatgtgaaatcaaaaacaactgatctgaaacgagttacgtatcttgtcttcgat
gaagcagatcgaatgtttgatatgggctttgaaccgcaagtgagatctattgctaatcac
gtcagaccagatagacaaacaatgctattcagtgcgacattcaaaaagaaagttgaacgt
cttgctcgtgatgcactcactgatccaattcgtgttgtgattggagagttaggagaagca
agtgaggatgtcactcaacatgttcacatatttgctactcgagaggagaagtggccgtgg
gttaagaagaatcttgttcagtatttatcaagtggaagcgtcctcatttttgtgacaaag
aaagcagattcagaaaccctagctgccagtctaagaagcaatgactttgaacttggtctt
ctgcatggagacatggatcagaactctcgagatgagataatcacaaagttcaggcggaaa
cagttagccattcttgttgctacagacgtggcttctcgtggacttgacattcagcatatc
aaaactgtcattaattatgacattgcgagagacatcacaacacatacacacagaattggt
cgaacaggacgagcaggagagaaaggtgttgcacatacattactgaccaacaaagacgta
cactttgcaggagatcttgtgagaaatatggaacaagctaatcaagctgttcccagctct
ctattagacttggcaatgcagaatcctaggttcaagaagactcgcttcaaccgaggaggt
ggtggagggagacgcgcaggcatagggagagggagaggagggccaggtcttgggtacagt
tcatctgcatcatctgctggtggacgtgcaagacctggatttgttggattttcccaggga
gaaaacttgagttcaaaatcatctgggacttctcctgtcaagaaggcaacaggaacttca
ggatatgtggctttctccaagggtgacagtctttcaagtgttgctggtacaaagtcgtct
gactctgcatcatctgcagcccctggtccaatgtcggcaggtggaggaagatcagcttta
cttaaagcggcatttgcagctaaatattcacgttttcaacgctcatcagactccacatca
tctcaaacaatgagcacatcaggagaaggagcagtcccacctcagcagccagcaaaaccc
gaaggaaagaaacgacgcagtcgatgggactaa
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