Corticium candelabrum: 134193976
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Entry
134193976 CDS
T11492
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cclm Corticium candelabrum
Pathway
cclm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134193976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclm03021
]
134193976
03036 Chromosome and associated proteins [BR:
cclm03036
]
134193976
Transcription machinery [BR:
cclm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134193976
Coactivators
SAGA/TFTC/STAGA complex
134193976
Chromosome and associated proteins [BR:
cclm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
134193976
STAGA complex
134193976
TFTC complex
134193976
SAGA complex
134193976
SLIK complex
134193976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
TFIID_NTD2
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Tricorn_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
Beta-prop_EIPR1
WD_LRWD1
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
134193976
NCBI-ProteinID:
XP_062518837
LinkDB
All DBs
Position
18:6348716..6364514
Genome browser
AA seq
647 aa
AA seq
DB search
MENQRQQDLVTVLQFLERNNMKATADMLKQEASFSGEALDEQMNTSGGIASVLTRTEDLT
QYTTSYTSLQTFINKSLDMYKCEMSQVLWPLFVYLYLDLMGRGCYKDAKQFYDRFSTEQD
AYRDVELRSLAIVETTEHIQTVEIARMFRLKKYVVRMSREACQCLLRHLQESDQSLLLNV
MNTYISVDLYDGMPRTATELQAVAGGIGGEGVTAVNKMKVFYGVRKDPELLMAAAADQEE
EELGEDGKTKKKKPKKDTAGKKGKPTSSTNAPPATRVPFPDLKNHEKELKIQALRETAKK
AKLDREHLPSIYFYTFLNTHGGLNCVNVSDDSAVVSTGYANSSILLRSLTPQKLKLLKPP
FELDKIDLESNNLMEKLLDDSSGRDQRTLIGHSGPVYSTSFSPDRSLLVSASEDGTARLW
SLHTYSNVVVYKGHNCPVWDVDFGPRGYYFATAAYDHTARLWATDNVQPLRLFIDRLLDV
NSVRFHPNGNYIATASSDRTCHLWDITSGQCVRFFTGHKKEILSLDFSPDGRFLASGGAD
RQVLLWDIADGRLVKDLSGHRGDVHSVCFSREGEVLTSGCSGGLVKVWDGKLWQDMLKEE
TLEPRIDAPLDAFGVYATKSTPVRRLHFTYRNLLLGFGPYEGTKSAK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaacgacagcaagatctcgtcactgtgttgcaattcctggagagaaacaac
atgaaggcaactgctgacatgttgaagcaagaagcaagttttagtggagaagctctggat
gaacagatgaacacatctggtggtattgctagcgtgttgacgagaactgaagatttgaca
caatacacaacatcatatacaagtctgcagacgtttattaataaatctttagatatgtac
aagtgcgaaatgtctcaagttctttggcctttgtttgtatatctgtatttggatctcatg
ggcagaggatgttataaagatgccaagcagttttacgatcgcttttcaactgaacaagat
gcgtatcgagatgtggaactacgaagtttggctattgtggagacaacagaacatattcag
actgtagaaatagcaaggatgtttagattaaagaagtatgttgtacggatgtcaagagaa
gcttgtcaatgtttactgagacatctccaggaaagtgatcaaagtttgttgctcaatgta
atgaacacatacatatccgttgatttgtatgatggcatgccaaggactgcaacagaatta
caagctgtagcaggtggtattggaggggagggtgtcactgcggtgaataagatgaaggtc
ttttatggtgttcgtaaggatcctgagctgctgatggcagctgctgctgatcaggaggaa
gaagaacttggtgaagatggcaagacgaagaaaaagaagccgaagaaagatactgcaggc
aagaaaggaaaaccaacctctagcactaatgccccaccagccactcgtgttccattcccc
gacttaaaaaatcacgaaaaagaattgaaaatccaagctctgcgagagacagcaaagaaa
gctaaattagacagggaacacttgccttcgatttacttctatacgtttctaaatacacat
ggagggttgaattgtgttaatgtatctgatgattcagcagttgtgagtactgggtatgca
aactcgtcgattctgttgcgatctcttacgccacaaaagctgaagttgctgaaaccgcca
tttgagttggacaaaattgatttagagtctaataatttaatggagaagttgcttgatgac
agttctggtcgagatcaacgaactctcattggtcacagcgggcctgtctactcaacaagc
tttagtccagatcgaagtctcttagtctcagcatcagaggacggaacggctcgcttgtgg
agtcttcacacgtacagtaatgtggttgtgtataagggacacaactgtccagtctgggat
gtggactttggacctcgagggtattactttgcgactgccgcgtatgatcacacggctcgt
ctctgggcaaccgataacgttcaaccattgcggctgtttattgatcgactgctggatgta
aatagtgtgcgttttcatccaaacggcaactacatagcaaccgcgtcctcagatcgcact
tgccacttgtgggacatcacatcaggccagtgcgtccgcttctttacaggacacaaaaag
gagattttatcactcgatttttcacctgacggacgatttcttgccagcggtggagcagat
cgtcaagtgctgttgtgggatattgccgacggtcgtcttgttaaagatctttctggtcac
cgtggtgatgtacatagcgtctgttttagcagggaaggagaggttctaacatcaggctgc
agtggtggactggtgaaagtgtgggatgggaaattatggcaagacatgttgaaggaggaa
acacttgagccaagaattgatgctccattggatgcttttggtgtatatgccacgaagtca
acgcccgttcgtcgattacattttacctacagaaatctgctgctaggatttggaccttat
gagggaactaagagtgcaaagtag
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