Corticium candelabrum: 134195489
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Entry
134195489 CDS
T11492
Name
(RefSeq) polyadenylate-binding protein 1-B-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
cclm Corticium candelabrum
Pathway
cclm03015
mRNA surveillance pathway
cclm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134195489
09123 Folding, sorting and degradation
03018 RNA degradation
134195489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134195489
03041 Spliceosome [BR:
cclm03041
]
134195489
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134195489
mRNA cycle factors
Stress granule specific factors
134195489
Spliceosome [BR:
cclm03041
]
Complex C
Other components
Complex C specific factors
134195489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MLLE
RRM_1
ApbA_C
RRM_occluded
RRM_10
Motif
Other DBs
NCBI-GeneID:
134195489
NCBI-ProteinID:
XP_062520499
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All DBs
Position
20:1131817..1143213
Genome browser
AA seq
649 aa
AA seq
DB search
MWQVFGELTVTEYWKTKGQAALMFTTVYVKNFGEDFNEEEMREMFGAFGSITSLEVMFDQ
GGKSCGFGFVSFETHEGAARAVEEMNGKEINGRVIYAGQPQKQAERMNELRSRFELMKME
RMKRFQGVNLYIKTLDDEIDNGTLRKEFSPYGTITSAKVMMDQQGRSRGFGFVCFSSPEE
ATKAVTEMNGRIIISKPLYVALAQCKEERCAQLTQQYMQRMQQQRPFFQTFPPQAARPRA
WNQQQLCTTYAPFSMMAQQHRAAANRMMRPLGPRSPFQQQRGDHFPGQRRFVQQPARATA
YRYTPGVHNPPAVPAVPPSQQSGPNPQQGIGQVGSHPPLTSQALSEASPQEQKQMLGERL
YPLICETHPELAGKITGMLLEIDNAELLHMLDEADLLKRKVDEAVNVLRAHQIKEQTKVP
SPDDTAYPYTPGVRNPPAVPAVQVGSHPPLTSQALSEASPQKQKQMLGERLYPLICETHP
ELAGRITGMLLEIDNAELLHMLDEADLLKRKVDEAVNVLRAHQIKEQTKVPSPGDTAYPY
TPGVRNPPAVPAVQVGSHPPLTSQALSEASPQKQKQMLGERLYPLICETHPELAGRITGM
LLEIDNAELLHMLDEADLLKRKVDEAVNVLRAHQIKEQTKGPSSGDAAQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaggtattcggcgagcttacagtcactgagtactggaaaaccaaaggtcaagct
gctctaatgtttacaactgtgtatgtcaagaactttggtgaggacttcaatgaggaagag
atgagggaaatgtttggagcgtttggtagcatcactagcttggaagttatgtttgatcaa
gggggcaaatcttgtggatttggatttgtgtcttttgagacacacgagggagcggctagg
gctgtagaagagatgaacggtaaagaaataaacggtcgtgtcatttatgctggtcaacct
cagaagcaagccgaacgaatgaacgagctcaggagtcgctttgaactgatgaaaatggag
agaatgaaacgctttcagggtgttaatttatacatcaaaactctggacgatgaaattgac
aatggaactctgagaaaagagtttagtccatacggaacaattacaagtgcaaaggtgatg
atggatcagcaaggtcgttctcgcggttttggcttcgtgtgcttttcgtctcctgaagag
gcaactaaagcggtgaccgaaatgaacggtcgaatcattatcagcaagcctctctacgtt
gctcttgcccaatgtaaggaggaaaggtgtgctcaactgactcaacaatacatgcaacga
atgcaacagcaaagaccgttctttcagacgtttccacctcaagccgctcgtcctcgtgct
tggaatcagcagcagctgtgcacaacgtatgcaccattcagcatgatggctcagcaacat
cgtgcagccgcaaaccgcatgatgcgtcctctgggtccaagaagtccattccagcaacaa
cgtggcgaccacttccctggtcaacgaaggtttgttcagcagccagctcgagcgactgca
taccggtatacacctggtgttcataatccacctgctgttcctgctgtgccaccttctcag
cagtctggtccgaatcctcagcaaggaatagggcaagtgggcagccatcctcctctgacg
tcacaagctctttctgaggcgtctccacaggagcagaagcagatgctcggtgagcgattg
tatccgctgatttgtgagacgcatccagagttggctggtaagatcactggcatgttgttg
gagatcgacaatgcagagttgctgcacatgctggatgaggctgatctgttgaagaggaag
gttgacgaggcggtcaacgtgctgagagctcatcagatcaaggagcagacgaaagttccg
tcgcctgacgatactgcatacccgtatacacctggtgttcgtaatccaccggctgttcct
gctgtgcaagtgggcagccatcctcctctgacgtcacaagctctttctgaggcgtctcca
cagaagcagaagcagatgctcggtgagcgattgtatccgctgatttgtgagacgcatcca
gagttggctggtaggatcactggcatgttgttggagatcgacaacgcagagttgctgcac
atgctggatgaggctgatctgttgaagaggaaggttgacgaggcggtcaacgtgctgaga
gctcatcagatcaaggagcagacgaaagttccgtcgcctggcgatactgcatacccgtat
acacctggtgttcgtaatccaccggctgttcctgctgtgcaagtgggcagccatcctcct
ctgacgtcacaagctctttctgaggcgtctccacagaagcagaagcagatgctcggtgag
cgattgtatccgctgatttgtgagacgcatccagagttggctggtaggatcactggcatg
ttgttggagatcgacaacgcagagttgctgcacatgctggatgaggctgatctgttgaag
aggaaggttgacgaggcggtcaacgtgctgagagctcatcagatcaaggagcagacgaaa
ggtccgtcatctggcgatgcagctcagtga
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