Corticium candelabrum: 134197432
Help
Entry
134197432 CDS
T11492
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
cclm Corticium candelabrum
Pathway
cclm03018
RNA degradation
cclm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134197432
09123 Folding, sorting and degradation
03018 RNA degradation
134197432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134197432
03041 Spliceosome [BR:
cclm03041
]
134197432
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134197432
mRNA degradation factors
5'-3' decay
Lsm complex
134197432
Spliceosome [BR:
cclm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
134197432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
134197432
NCBI-ProteinID:
XP_062522741
LinkDB
All DBs
Position
22:1158153..1159925
Genome browser
AA seq
96 aa
AA seq
DB search
MAGTLESCVNQTVAIVTNDGRIIVGLLKGFDQTINVILENSHERVYSSASGVEQVALGLY
IIRGDNIAVIGEIDEEMDSTLDLSEIRAEPLNAIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggctggcacgctagaatcgtgtgtaaatcaaactgtggcaattgttactaacgatggc
agaattattgtgggtttattgaaggggtttgatcagacaatcaatgtgatacttgaaaac
agtcatgaacgagtgtattcatcagcctctggagttgaacaggtcgctctaggtctctac
atcattcgaggagacaacatagctgtgattggtgagatagatgaagaaatggacagcact
ttagacttgagtgaaatcagagcagaacctttgaatgcaattgtacactga
DBGET
integrated database retrieval system
