Corticium candelabrum: 134197630
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Entry
134197630 CDS
T11492
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cclm Corticium candelabrum
Pathway
cclm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134197630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclm03041
]
134197630
Spliceosome [BR:
cclm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
134197630
Complex C
U5 SnRNP specific factors
134197630
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
134197630
NCBI-ProteinID:
XP_062522961
LinkDB
All DBs
Position
1:15950664..15967383
Genome browser
AA seq
2347 aa
AA seq
DB search
MAALPYRPPHVMEGPPRGWYQPPSLLPDVQPFMVRQELSEEKLKEKARKWQQLQSKRYSE
KRKFGFVEAQKEDMPPEHVRKIIRDHGDMSNRKFRHDKRVYLGALKYMPHAILKLLENMP
MPWEQIRDVKVIYHITGAITFINEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFP
PFDDEEPPLDYGDNILDVEPLEPIQIDMDEEEDASVHKWFYDYKPLVGSKCVNGSTYRRW
YLQLPAMSTLYRLANQLLTDLVDDNYFYLFDLKSFFTAKALNLAIPGGPKFEPLVRDKDM
QDEDWNEFNDVNKIIIRQQVRTEYRIAFPYLYNNMPLYVHLSWYHYPVVVFIKTEDPDLP
AFYFDPLINPIGSHRHTVKTNEPQPDDDEFVLPEEVEPLLKDTPLYTDNTANGIALLWAP
RPFNLRSGRTRRAVDIPLVKTWYREHCPSGQPVKVRVSYQKLLKVYVLNALRHRSPKALK
KRYLFRSFKATKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVK
TLTTKERKKSRFGNAFHLCREILRLTKLVVDGHVQYRLGNVDCFQLADGIQYIFAHVGQL
TGMYRYKYKLMRQIRMCKDLKHVIYYRFNTGPVGKGPGVGVWAAGWRVWMFFLRGIVPLL
ERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHYDLELRAAVMHDILDMMPEGIKQNKART
ILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKSKADWWTNTAHYNRERIRRGATVD
KTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISAEEAVAIYTTTVHWLESRRFSPIPFP
PLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQ
RAFKEVGIEFMDLYSHLIPVHDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPP
PLLVYKWCQGINNLQDVWDSAEGECNVAMETSYEKLYDKIDLTLLNRLLRLIVDHNIADY
MTAKNNVVINYKDMNHTNSYGIIRGLQFASFVVQYYGLVLDLLVLGLNRASEMAGPPQMP
NDFLTFQDVQTEIAHPIRLYCRYVDRIFMFFRFSADEARDLIQRYLTEHPDPNNENVVGY
NNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSISTIQWDSSFVSVYSKDNPNLLFD
MCFFECRILPKCRTSLEEFTHKDGVWNLQNEVTKERTAQCFLRVSDEGMNRFHNRIRQIL
MASGSTTFTKIVNKWNTALIGLMTYFREAAVNTQELLDLLVKSENKIQTRIKIGLNSKMP
SRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTNVGITHFRSGMSHEEDQLIPNL
YRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRH
TLAYDKGWRVRTEFKAYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHT
LFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVY
VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVFDQELDALEIET
VQKETIHPRKSYKMNSSCADILLFAAYKWNTSKPSLLADSKDVMDSTTTQKYWLDVQLRW
GDYDSHDIERYARAKFLDYTTDSMSIYPSPTGILVALDLAYNLYAVFGNWFPGSKPLMQQ
AMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRV
TIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLSQLAKWKTAEEVAAL
IRSLPIEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKLGDLILK
ATEPQMVLFNLYDDWLKNISSYTAFSRLILILRALHVNTDRTKVILKPDKTTITEPHHIW
PTLSDEEWIRIEVQLKDLILADYGKKNNVNVNSLTQSEIRDIILGMEISAPSQQRQQIAE
IEKQTKEQSQLTATTTRTVNIHGDEIVATTTSNYETQTFASKTEWRVRAISATNLHLRTN
HIYVSSDDIKETGFTYILPKNILKKFIVVSDLRTQIAGFIYGVSPPDNPQVKEIRCVVLV
PQWGTHQTVHLPNQLPEHEYLEDIEPLGWIHTQPNELPQLAPQDVTMHAKIMAENPSWDG
EKTIVMTCSFTPGSCSLTAYKLTPAGYEWGRSNKDTGNNPKGYLPSHYEKVQMLLSDRFL
GFFMVPATGPWNYNFMGVRHSVGMRYDLQLANPKEFYHEVHRPSHFLNFAMMEESEVAGT
DREDMYS
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttgccgtatcgtccgcctcatgtcatggaagggccacctcgtggatggtac
caaccacctagtttactccctgatgtacaaccgtttatggtgcgacaggagctatctgag
gagaaacttaaggaaaaggctcgcaagtggcagcagttgcagtccaagcgatacagcgag
aaacggaaattcgggttcgtggaggctcaaaaggaagatatgccgccagagcacgtgcgt
aaaattatccgggatcatggcgatatgtcaaaccggaaattcagacacgacaagcgagta
taccttggagcattgaagtacatgccacacgcaattctaaagcttttggaaaacatgccg
atgccgtgggaacagatcagagatgtcaaggtgatctaccacattacaggagctataacg
tttatcaatgaaataccatgggtaattgagcctgtctacatagcccaatggggtactatg
tggatcatgatgcggagagaaaaacgagacagacgtcattttaagcggatgcgtttccct
ccttttgatgatgaagagcctcctcttgactatggagacaacatattggatgttgaacca
ctggaaccaatccagatagacatggatgaagaggaagatgcatcagttcacaagtggttt
tatgactacaaacctcttgtaggctccaagtgtgtgaatgggtcaacgtacaggcgttgg
tatttacaacttcctgccatgtcaactctttaccgtcttgctaaccagctgctcactgat
ctagttgatgacaattacttttatctgtttgatctcaaatcattttttacagcaaaggcc
cttaatcttgccatacctggtggaccaaagtttgagcctcttgtcagagacaaggatatg
caggatgaggactggaatgaattcaatgatgtgaacaaaatcattattcggcaacaagtg
agaacagagtatcgaattgcttttccttatctttacaacaacatgccactctatgttcac
ctcagttggtaccattaccctgttgtggtattcataaagactgaagatccagatttgcca
gctttctactttgatcctcttattaacccaattggatcacacaggcatactgtcaaaacc
aatgaaccacaaccagatgatgatgagtttgttttgcctgaagaagttgaaccgcttttg
aaagatacgcctctttacacagacaacactgctaatggcatcgcattactgtgggcccct
cgaccatttaacttgcgatctggcagaactcgacgtgcagtagacatacctcttgtgaag
acttggtatcgggaacactgtcccagtggacagcctgtgaaagtgagggtttcatatcag
aaattgctgaaagtgtatgtcctgaatgcactgaggcacagatcacccaaggcactgaag
aaacggtacttgtttcggtccttcaaagctaccaagtttttccagacaacaacattggac
tgggttgaagcaggactgcaggtgtgccggcaaggatacaacatgttgaatttgctgatt
caccggaagaacctcaactacctgcatctcgactataattttaacttaaaaccagtcaaa
acactgacaacaaaggaaagaaagaagtcacgatttggcaatgctttccatttatgtcga
gaaattcttcggctgaccaagttggttgttgatggccatgttcagtatcgactcggaaat
gtcgattgttttcagttggcagatggcattcaatacatctttgcacatgttggtcagctg
actggtatgtatcgatacaagtacaaactgatgcgtcaaataagaatgtgcaaagaccta
aagcacgttatctactatcgtttcaatacaggtcctgttggcaaaggtccaggtgttgga
gtttgggctgctggttggcgagtatggatgttctttcttcgtggcattgttccattgctt
gagcgttggcttggcaatcttctttcacgtcaatttgaaggtcgtcactccaagggcgtt
gccaagacagtaacaaagcagcgtgtggagagtcattatgaccttgagcttcgagctgct
gtgatgcatgacatattagacatgatgcctgagggcatcaagcagaacaaagccaggacc
attctgcaacatttgagtgaggcttggcgttgttggaaggctaatattccttggaaagtt
cctggattgccaattccaattgagaatatgatcttgcgttatgtgaagtcaaaagctgat
tggtggacaaacactgctcactacaacagagagagaatcagaagaggagcaacagttgat
aaaacagtgtgtaaaaagaacttggggagacttactaggctttatttaaaggcagaacag
gagagacagcacaactacttgaaggatggtccatacatctctgctgaagaagctgttgct
atttacacaaccactgtccattggttggaaagcagacgtttctcgcctattccttttccg
cctttgtcatataagcatgacacaaagcttcttatcctcgctcttgagagactgaaagaa
gcatacagtgtgaagagtcgtttgaaccagtcacagagagaagaacttggtttgattgaa
caagcttatgacaaccctcatgaagcactgtctcgaatcaagaggcatttgcttacacag
agagcattcaaagaggttggtattgaattcatggacttatacagtcatctcataccagtg
catgatgtggagccactggaaaagataactgatgcttaccttgaccagtatctatggtat
gaggcagacaagcgtcgtctatttccaccatggatcaagccagctgacactgaacctcct
cctttattggtgtacaagtggtgtcaagggattaacaatttacaggatgtgtgggactca
gcagagggagagtgtaacgttgcgatggagacgtcctatgagaaactgtacgacaaaatt
gatcttacattactcaacagactgcttagactgatcgttgatcacaatattgctgattac
atgactgctaaaaacaatgttgttatcaattacaaggacatgaatcacactaattcatat
ggcatcattcgtggtttgcagtttgcatcatttgttgtccagtattatggcctggttctt
gacctgcttgttcttggattgaatcgagcatcagagatggccggaccgcctcaaatgccg
aatgactttcttacatttcaggatgttcaaaccgaaattgctcatcctattcgtttgtat
tgtcgctatgttgatcgtatattcatgtttttccgcttttctgctgatgaggctcgagat
cttattcaacgttaccttactgaacatcctgatccaaacaatgagaatgttgttggatac
aacaataagaaatgctggccacgggatgcaagaatgaggctgatgaaacatgatgtcaac
cttggtcgtgccgtgttctgggacattaaaaacaggctgccacgttctatcagcacaatt
cagtgggacagcagttttgtctcagtttacagcaaggacaacccgaaccttctctttgac
atgtgcttttttgaatgtcgtatattgccaaaatgtcgtacatcactggaagagttcact
cacaaagatggagtctggaatctgcagaatgaggtgactaaagagaggacagcgcaatgc
tttcttagagtaagtgatgagggaatgaatcgatttcataatcgtattagacaaatactg
atggcctcaggatcaacaacattcacaaagattgtgaacaagtggaacactgcactgatt
ggtctaatgacgtactttagagaagcagcagtcaacactcaggaactacttgatctttta
gttaagagtgaaaacaaaatccaaacacgtatcaagattgggctgaattccaagatgccc
agcagatttccacctgttgtgttttatactcctaaggagttaggcggtcttggcatgctg
tccatgggtcatgtgttaattcctcagtctgatcttaggtggtcaaaacagaccaatgtt
ggtattacccatttccgttctggcatgagtcatgaagaagatcagcttattccaaatttg
tacaggtacatccagccttgggaaagtgaattcattgactcacagagagtttgggcagag
tatgctttgaagagacaggaggctaatgcacaaaacagacgacttacacttgaagatctg
gaagacagttgggatagaggaattccacgtatcaacacactatttcagaaagacaggcac
acacttgcttatgacaagggctggcgagtgagaacagagttcaaagcgtaccaggtgttg
aagcagaacccattttggtggactcatcagaggcatgatggcaagctatggaatctgaac
aactatcgcacagacatgattcaggcgttgggaggtgtagagggcattctggaacacacg
ttgttcaagggaacgtattttccaacatgggaaggtttgttctgggagaaggctagtggt
tttgaagagtcaatgaaatacaagaaattgaccaacgctcagaggtcgggactgaaccag
attccaaacagaaggttcacgctgtggtggtcaccaaccatcaacagagccaacgtgtat
gttggatttcaagtgcagttagatctgactggcatcttcatgcatggcaaaattcccacc
cttaagatttcacttatccagatctttcgtgctcacttgtggcagaaagtccacgagagt
gtggttatggatctttgccaagtttttgaccaggaattggatgctcttgaaattgagaca
gtgcagaaggaaactattcatccaaggaagtcatacaagatgaacagctcatgtgctgat
attttgctctttgcggcatacaagtggaatacatccaagccatctctgctggcagactca
aaggatgtgatggacagcactactacacagaaatactggctggatgttcagttacgctgg
ggtgattatgactctcatgacattgagcgatatgctcgtgcaaaattccttgactacaca
actgatagcatgagtatctacccatctcctactgggatactagttgccttagacttggca
tacaatttgtatgctgtgtttggtaactggtttccaggatctaaaccattgatgcagcaa
gctatggccaagatcatgaaggctaatccagcgttgtatgttttacgtgaaagaattcgg
aaaggtttacagttatattccagtgaaccaactgagccatatctgtcgtcacagaactat
ggagaacttttctcaaatcagattatttggtttgttgatgatacgaatgtgtacagagtt
actattcacaagacttttgaagggaacttgaccacaaaacctattaacggtgccattttc
attttcaacccacgaactggtcagctgtttttgaagatcattcatacgtctgtgtgggct
ggccagaaacgtcttagtcagcttgccaagtggaagactgctgaagaagttgcagctcta
attcgttctttaccaattgaggaacaacctaaacaaatcattgtgacccggaaaggaatg
cttgatccacttgaggtccatcttcttgacttccccaacattgtgattaaagggagtgaa
ctacaactgcctttccaagcttgcttgaaggttgaaaaattgggtgatttgattctcaaa
gccactgagccacaaatggttctgttcaacttgtacgatgactggctgaaaaacatctca
tcgtacacggcattttcaagactcattttgatactgagagcgcttcatgttaacactgat
cgaaccaaggtgatcttgaaacccgacaagacaactattacagaacctcatcacatctgg
cctactttgtctgatgaagagtggatcagaattgaagttcaactgaaagatctcattctt
gctgactatggaaagaaaaataatgtcaatgtaaactcccttacacagtctgaaatccga
gatatcatactgggaatggaaatatctgccccttctcagcaaagacaacagatagctgag
atagagaaacaaacaaaggagcagtctcagctaacagccacaaccacaagaacagttaac
attcatggtgatgaaatagtggcaacaacaacaagtaactatgagactcagacatttgca
tcaaaaacggagtggcgtgttcgtgcaatctcagctaccaacctacatcttcgaacaaat
cacatctatgtctcatcagatgatatcaaggagactggatttacttacattttgcccaag
aatatactgaaaaagtttattgttgtctctgatttgaggacacaaattgcaggttttatc
tatggtgtgagtcctccagataatcctcaagtgaaagagattcgatgtgtggtgttggtt
cctcagtgggggactcaccagactgttcacttgccgaatcaacttcctgagcatgagtac
ctagaggacattgaacctcttggttggattcatactcagcccaatgaattaccacagctc
gcaccacaggatgttactatgcatgccaaaattatggctgagaatccaagctgggatgga
gagaagacaattgtcatgacttgcagttttactcctggctcttgctccctcactgcatac
aaacttactccagcaggatatgaatggggacggagcaacaaagacactggcaacaaccca
aaaggctatttgccttcacactatgagaaagtgcagatgcttttgtcagatcggtttctt
gggttttttatggtgcctgccactgggccgtggaactacaactttatgggtgttcgccac
tcagttggaatgcgctatgatttacagctggctaatccaaaggaattctatcatgaagtg
catcgtccatctcattttttgaattttgcaatgatggaagaaagtgaagtagccggtact
gatcgtgaagacatgtactcgtaa
DBGET
integrated database retrieval system
