KEGG   Coregonus clupeaformis (lake whitefish): 121530650
Entry
121530650         CDS       T08357                                 
Name
(RefSeq) methylcytosine dioxygenase TET3-like
  KO
K24309  methylcytosine dioxygenase TET2/3 [EC:1.14.11.80]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cclu03000]
    121530650
   03036 Chromosome and associated proteins [BR:cclu03036]
    121530650
Enzymes [BR:cclu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.80  methylcytosine dioxygenase
     121530650
Transcription factors [BR:cclu03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    121530650
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121530650
SSDB
Motif
Pfam: Tet_JBP
Other DBs
NCBI-GeneID: 121530650
NCBI-ProteinID: XP_041691708
LinkDB
Position
18:27381294..27436712
AA seq 1900 aa
METGSHDRLGQGGSLSLEPTNGVSQHPRDTHEEGGAGLEPQREPQRSRSVSPGQGWVHGH
SKATQPHQQQPCNGWSSSGRTPGKPVHEADMEDARNLVAFSASVSVGSLPPSGHPEPQSH
TTQLYEKFNQEMGTGEGAAAQARIQAPEGGNQDSPPEDLNTLQNALSQARHGQKPPNCDC
DGPDCPDYLEWLEKRIKQTGAGEERDNNMPCSKMTADKSPHKQPPHSQQSPHPHPHPQPH
VNGGNPLYCPPLHPHQQGQNPAPIPCCPQVLSIAKEKNVSLQTAIAIEALTQLSATVPQT
VVPPAQTSSPSHPQHPPQQPSPHLQHGTRLVPSSPDPLSSLSSSHSQSVPPGIYPQPQQS
PVSWEQQHRPQSQGHPAHASPLPSSTSPFPRQPQAGSPRPHPQQWQQQQGPGGSQEQRNQ
WMNSDSQQPRFAPPSSDHSAGDPMSKLKQLLGDSSGKYINGPFKLPVPHHHIKQEPGMPW
VKQEVDSREYQSSACASMEGCYGLMNGQQQPRYPGPPLSLGSAAIHQSTQTALQQHLHHK
RNLFSNPPGIPGLCPLRPAKACQNLRKWWPQKMGPESHPIPLAIKQEPKETKRRKSTAGI
SPVLKQHPVGGMLLQPGPKPKTIVIKKTKQKASLPTFLPHRQISIQKLSPLTMTGALPLA
SAHPGSLHLPTFPLLSNPTQAAAGLPSPAQSQVSILNSSIAPSVAASALSVNTPDVSTPQ
PLTVALDVPASSGEASATQTSAPQTSTTSQSIPGLSSLDPKFEELICQFEAEFGDSSSSA
PEPYPPQIQSQPQDQDPSASAQHVVTASQPNVNSGQARPPSPSSATITQSSSPPPLAPTT
APSTDQDMEVDKEKELGGVSEATSTSTIQPSTESPMEDKREGTKLPLSPSPLPKRMKIET
NGNVAVLSTTGLFSDGGEDDTPTKDGFPLNPSLKGFLESPLSYLDMPTKSLLDTPAKDLQ
AEFPTCDCVEQVLEKDEGPYYNHLGSGPTVASIRELMETRYGEKGDAIRIEKVVYTGREG
KSSQGCPIAKWVIRRGSETEKLLCLVRPRPGHHCPNAIIIILIMAWEGVPRALGDKLYRE
LSATITEFGNPTSRRCGLNDNRTCACQGKDPDSCGASFSFGCSWSMYFNGCKYARSKTPR
KFRLAGDHPQEEDQLRDNFQDLATELAPLYKQLAPQAYSNQCQNETTAPDCRLGLKEGRP
FSGVTACMDFCAHAHKDQHNLYNGCTVVCTLTKEDNRTVGEIPEDEQLHVLPLYKAALTD
EFGSEEGQRQKMRTGAIQVLNNFRREVRKLPEPAKSCRQRRLDAKNRASEKKKAKQQLPT
PTETPEKMVIKTEVRHAGSPVRQHGNKAIPKQEVKPTIKKEPVDQCHHPYHVYPSHPSYY
AQGGSPSNGQPPALPPPPGPANGYHPNVPSALPYGYYNLPPNPNTLFPHELTYKGRNGSW
HHAGHNAFPGPVDKKPDVQSLQARLAHSYSGPGHPEQQHGDPANQCNAYPHPHEPDYNQS
RPSSVSSEPSHRGTPVIKQEPMDVPVYEGGNTQSCPGTPSTTPQPGGPWPNGSMVSGSWE
GNLQPPGPPEAPFTSDKQQFHQQGPHQTSQSPYPQQQHQHPPQQPSPYPQQWNSYLGPNT
PMASPVPSLSPSPSPHPGTPRHWDSPAPSPQPKAWPMGMVPAGYCSSPARGFPDKMCSKA
GESRGSTPLALQEKAWKSFGGSMAGTQSPAPEACWDPNRAETPSDVESQRGRDLDEEERW
SDSEHNFLDPSIGGVAVAPAHGSILIECARRELHATTPLKRPDRSHPTRISLVFYQHKNM
NQPCHGQWLWEAKMKMLAERARERQQEAALLGLPYEDIKPGKKRKLGATAAGASPGPGQT
TEGPVMGLVTRLAPTHHTTSTVTVSPYAFTTLTGPYSHFV
NT seq 5703 nt   +upstreamnt  +downstreamnt
atggaaactgggtcacatgaccgcctcgggcaaggcggttcactgagcctggaaccgacc
aatggggtgagccagcatcccagggacacccatgaggagggtggagctggcctggagccc
cagagggagccccagcggtcaaggagtgtttccccaggacagggctgggtacatgggcac
agcaaagccacccaaccccatcagcagcagccctgcaatggctggagcagtagtggtagg
actcctgggaagcctgtccatgaggcagacatggaggatgcacgcaacctggtagccttc
tcagccagcgtgagtgtgggctccctgcccccctcaggtcatcccgagccccagtcccac
accactcagctgtatgagaagttcaaccaggagatgggcactggtgagggggctgcggct
caagccaggatccaagccccagaaggaggaaaccaggatagccccccagaggacctgaac
accctgcagaatgccctgagccaggcacggcatggccagaaaccccccaactgtgactgt
gatgggccagactgcccagactacctggagtggctggagaagaggatcaaacagacaggg
gcaggggaggagcgggacaacaatatgccctgctccaagatgaccgctgacaagtcgcct
cataaacagcccccacactcacagcagtccccccacccccatcctcacccccaaccccat
gtcaatggaggtaaccctctctactgtccacccctacacccacaccaacaaggccaaaac
ccagcccctatcccctgctgccctcaggtcctctccatcgccaaggagaagaacgtcagt
ctgcagacggctattgcaatcgaggccctgacccagctgtctgcaactgtcccccagacc
gtggtccctcctgcccagacctcctcccccagccaccctcaacaccccccccaacaaccc
tctccacacctccagcacggcacccgcctggtcccctcctcccccgaccccctctcctct
ttgtcctcctcgcattcacaatccgtccctcctggaatatacccccagccccagcagagc
cccgtgtcgtgggagcagcagcacagaccccagtcacagggccatccggcccatgcctcc
cctctcccgtcctccacttcgcccttccccaggcagccccaggcaggcagcccccggcct
cacccccagcagtggcagcagcagcagggccctgggggatcccaagagcagaggaaccag
tggatgaactcagattcccagcagcctcgttttgcccctccgtccagtgaccacagcgct
ggcgaccccatgtccaagctcaaacagctactgggggactccagtggaaaatacataaac
ggccccttcaagttgcccgtcccacaccaccacatcaagcaggaaccagggatgccttgg
gtcaagcaggaggtagactccagggagtaccagagctctgcctgcgcctccatggagggc
tgctatggcctgatgaatggccagcagcagcctaggtaccctggtccacctctctccctg
ggcagtgcagccatccaccaatccacccagacagctctgcagcagcaccttcaccacaag
aggaacctcttctccaaccctcctggcatcccaggcctctgccctctgcggcctgccaag
gcctgccagaacctccgcaagtggtggccccaaaagatgggccccgagagccaccccatc
cccttggccatcaagcaggagcccaaggagaccaagaggaggaagagcacagcggggata
tctccggtcctcaagcagcacccagtgggtgggatgctgctccagccaggccccaaaccc
aagacgatagtgatcaagaagaccaagcagaaggcctccctgccaaccttcctgcctcac
agacagatctccatacagaaactgtctcccctcaccatgaccggagccctgcctctggcc
agcgcccacccaggttctctccatctccctaccttccccctcctcagtaaccccactcag
gcagccgcaggcctcccttccccggcccaatctcaggtatccattttaaactcttctatt
gcaccctctgtcgctgcttctgccttgtctgtaaacactccagacgtctcaacccctcag
cctctcactgtagccctggacgtcccggcaagctcaggggaggccagcgccacacagacc
tccgcccctcagacctccaccacctcacagtccataccaggcctcagttccctggacccc
aagttcgaggagctgatctgccagttcgaggcagagttcggggacagctcatcctcggcc
ccagagccctaccctcctcagatccagagccagccccaggaccaggacccctcagcctca
gcccagcacgtggtgacagcgtctcagcccaacgttaactcaggacaagccaggccccca
tcaccatccagcgctaccatcacccagtcctccagccctcctcctttagctcctaccaca
gccccatcaacagaccaggacatggaggtggacaaggagaaggagttagggggtgtgagt
gaagcaacctccacctccactatacagccctccactgagagccccatggaggataagcgt
gaggggaccaagctgcctctctccccgtccccactgcccaaacgcatgaagatcgagacc
aatgggaacgtagctgtcctctccaccactggattattctctgatgggggcgaggacgac
acccccactaaggacggcttcccccttaacccctccctaaaaggcttcctggagtcgcca
ctaagctacctggacatgcccactaagagcctgctagacacgcccgccaaggacctccag
gctgagttccccacctgcgactgtgtcgagcaagtcctggaaaaggatgagggtccgtac
tacaatcacctgggctctgggcccactgtggcctccatacgagagctgatggagactagg
tatggagagaagggagatgctatccgtattgagaaggtggtctacaccggccgggaaggc
aagagctctcagggatgtcccatcgccaagtgggtgattcgtcggggcagtgagacagag
aagttgctgtgtctggtgcgtccccggccgggtcaccactgtcccaacgctatcatcatc
atcctcatcatggcgtgggagggcgtaccacgggcgctaggtgacaaactctaccgagag
ctctccgccaccatcaccgagttcggcaaccccaccagccgccgctgtggactcaacgac
aatcgtacatgtgcgtgccaaggcaaggaccctgacagttgtggagcttccttctccttc
ggctgctcctggagcatgtactttaacggctgcaagtacgcccgcagcaaaacaccccgc
aagttcagactggcaggagaccacccccaagaggaggatcaactcagggataacttccag
gatctggccactgagttggctcccctgtacaagcagctggccccacaggcctacagtaac
cagtgtcagaatgagacgacggctccagactgcaggttgggtctgaaggagggccggccc
ttctctggtgtcaccgcctgcatggatttctgtgcccacgctcacaaggaccagcacaac
ctctacaacggctgcactgtggtgtgcactctgactaaagaagacaaccgtacggtgggg
gagatcccagaggatgagcagctccacgtacttcccctctacaaggccgccctcacagac
gagtttggcagcgaggagggccagcgccaaaagatgcgcactggcgccattcaggtgctt
aacaacttccgccgtgaggtccgcaagctgcccgagcccgccaagtcctgccgccagcgc
cgcctggacgctaagaaccgcgcctcggagaagaagaaggccaagcagcagctgccaacg
cccacggagacgccggagaagatggtgatcaagacggaggtccggcacgctggctcccct
gtcagacagcatggcaataaagcgatccctaagcaggaggtgaagcccaccataaagaag
gagccagtggaccagtgccaccacccctaccacgtctacccctcccaccctagttactac
gcacagggaggctccccttccaatggccagccccctgcacttccacctccaccaggccct
gccaacggctaccaccccaatgtaccctcagcactgccctacggctattacaacttaccc
cccaaccctaacacacttttcccccatgagctcacttacaagggccgcaacggctcctgg
catcacgcggggcacaatgctttccccggccctgtggacaagaagccagacgttcagagc
ctccaggccaggctggcacactcctactcaggcccaggccaccccgagcagcagcatgga
gacccagctaaccaatgcaatgcttacccacacccacacgagcctgactacaaccaatca
cgtccctcctcagtctcctcagagccctcccacagagggacccctgtcatcaagcaggag
cccatggatgtgccagtgtatgaggggggcaatacccagagctgtcccggcactcccagc
accacaccacagcctggagggccctggcccaacggcagtatggtgtcaggcagctgggaa
ggcaacctccaaccaccaggccccccggaggctcccttcacttcagacaagcagcagttc
caccagcagggacctcaccagacttcccagtccccatacccccaacagcagcatcagcat
cccccacaacagccctccccgtacccccagcagtggaactcttaccttggccccaacacc
cccatggcctcccctgttccctccctgtccccctctccttccccacaccccggcaccccc
cgccactgggacagccctgctcccagccctcagcctaaagcttggcccatgggcatggtt
cctgctgggtactgctctagccccgccagaggcttccccgacaagatgtgctccaaggcg
ggcgagagtcggggctcgacccccctagctctccaggagaaggcctggaagtctttcgga
ggctccatggcaggtacacagtctccagccccagaggcctgttgggaccctaaccgggcc
gagaccccgagcgacgtcgagagccagagaggtcgcgacctggacgaggaagagcggtgg
tcggacagcgagcataacttcctggaccccagcattggaggggtggcggtggcacccgcc
cacggttcaatcctgatcgagtgtgcccggcgtgagctgcacgccaccacgccgctcaag
aggcctgaccgctctcaccccacccgcatctctctggtgttctaccagcacaagaacatg
aaccagccctgtcacggccagtggctctgggaggccaagatgaagatgctggcggagcgg
gctagagagaggcagcaggaggcagctctactggggctgccctatgaggacatcaaacct
gggaagaaacgcaagttgggggccacggcggcaggggccagcccggggcctggccagacc
acggaggggccagtgatggggctggtgacgcggctggcccccactcaccacaccacctcc
acggtcactgtgtccccctatgcctttaccaccctcactgggccctacagccactttgtg
tga

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