Coregonus clupeaformis (lake whitefish): 121530656
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Entry
121530656 CDS
T08357
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121530656 (zgc:65851)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121530656 (zgc:65851)
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121530656 (zgc:65851)
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
121530656 (zgc:65851)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Ski7_2nd
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
121530656
NCBI-ProteinID:
XP_041691719
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All DBs
Position
18:27898817..27905819
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AA seq
523 aa
AA seq
DB search
MSYSGDVYSSSSYRKIFGDAPRSSGRMTVGSSPSRLSSGFRSSGAHRNYGSPSMLTSSGY
RKVGAGRNFHSSMSDSMDLNQSTAVTNEMKIIRTNEKEQLQGLNDRFVSFIEKVHNLEQQ
NKVLEAEVTMLRQRHTEPSRLHDLYEQEIRELRARVEELTHEKSQMHLDCVQMNETLDRV
RQKLDEETRLREEAEGTLISYRKDVDDATMSRLELEKKVESLLDEIAFLRKVHEEELQEL
QASLQATQVSVEMDLREGKPDLAVALKDIRAQYEVLSAKNQNQAEEWYRSKFASVNEAAA
RNQDQVKHSREELNEYRRQVQARTLEIEALRGHNEALERQMAEMEDRHSNEMGEMQETIQ
QLESALHSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSTVGGNILQSGY
SGFSYSSGRSYALGSSAPYRMRVAKPEEPEEEEDEEEKEEEEEEEENEEEGEEGEEGDEN
AEENGNEDEEEEEEEEEEDQKKKDEKDEKKGEKGSAPSKSTKS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagttactccggcgatgtctactccagtagttcctatcggaagatcttcggggatgcg
ccccggagctccggccgcatgaccgtaggcagcagcccctctcgcctgtccagcggattc
cgctccagcggcgcacaccgcaactatggctccccatccatgctcacatcctccggctac
cgcaaggtgggcgccgggcgcaacttccactcctccatgtccgactccatggacctgaac
cagtccacggccgtcaccaacgagatgaaaatcatccgcaccaacgagaaggagcagctc
cagggcctgaacgaccgcttcgtctccttcatcgagaaggtccacaacttggaacagcag
aacaaggtgctcgaagccgaggtgaccatgctgcgccagcgccacaccgagccctcccga
ctgcacgacctgtacgagcaggagatccgcgagctgagggcgcgcgtcgaggaactgact
cacgagaagagccagatgcacctggactgcgtgcagatgaacgagacgctggaccgcgtt
aggcagaagctggacgaggagacgaggctccgcgaggaggcggagggcaccctgataagc
taccgcaaggacgtggatgacgccacgatgtcccggctcgagctggagaagaaagtcgag
tcgctgctggatgagatcgccttcctcaggaaagtgcacgaggaggagctgcaggagctg
caggcttccctgcaagccacacaggtgtcagtggagatggacctgagggagggtaaaccc
gacctggccgtggccctgaaggacatccgtgcccagtacgaggtcctgtcagccaagaac
cagaaccaggctgaggagtggtaccgctccaagttcgccagtgtgaatgaggcggccgcc
cgcaaccaggaccaggtgaagcatagcagggaggagctaaatgagtaccgcaggcaggtg
caggcccgtaccctggagatcgaggccctcaggggccacaatgaggccctggagaggcag
atggctgagatggaggaccgccacagcaatgagatgggagagatgcaggagaccatccag
cagcttgagtctgccctccacagcaccaagggtgagatgtcccgtcacttgcgtgagtac
caggacctgttgaacgtcaagatggccctggacattgagatcgctgcttacaggaagctg
ttggaaggtgaagagtgccgtctgagtacagtgggcggaaatatcctgcagtcaggctac
tctggcttctcctattcgtccggccgctcctacgccctgggttcctccgccccctacagg
atgagggtagccaagcctgaggaaccagaggaggaggaggatgaggaagagaaggaggaa
gaggaagaggaagaggagaatgaggaggagggagaggagggagaggagggagatgagaat
gcagaggagaatggaaacgaagatgaggaggaagaggaggaagaggaggaggaagatcaa
aagaagaaggatgagaaggatgagaagaagggagagaaaggaagtgctcccagcaagagc
accaagagctaa
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