Coregonus clupeaformis (lake whitefish): 121530663
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Entry
121530663 CDS
T08357
Name
(RefSeq) vesicle-associated membrane protein 8
KO
K08512
vesicle-associated membrane protein 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121530663
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121530663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121530663
Membrane trafficking [BR:
cclu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
121530663
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Integrase_H2C2
Baculo_F
DUF5693
ODV-E18
LRRC37AB_C
LMBR1
DotU
DUF3619
RIFIN
RNF152_C
Orf78
Motif
Other DBs
NCBI-GeneID:
121530663
NCBI-ProteinID:
XP_041691731
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Position
18:complement(28389192..28393932)
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AA seq
119 aa
AA seq
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MDNDLEQGEVVEQDKVRTLQSQVEGVKDIMTQNVDRILARGERLDDLMGKSEDLQAGAED
FKHTSQKVARAYWWKNMKLWVVIVVIVLVIILIIVLLSTGVIPTSSPVPPLPKPTKISN
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggataatgatctggagcagggagaggtggtggagcaggacaaggtgaggaccctgcag
tctcaggtggagggagtgaaggacatcatgacccagaacgtggaccggatcctggcccgg
ggagagaggctggacgacctgatgggcaagtcagaggacctgcaggctggggctgaggac
ttcaagcacacgtcccagaaggtggctcgcgcctactggtggaagaacatgaagctgtgg
gtggtgatcgtggtcatcgtcctcgtcataatcctcatcatcgtactgctcagcactggc
gtcatcccaaccagctcccctgttcccccacttcccaaacctactaaaatatcaaactag
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