Coregonus clupeaformis (lake whitefish): 121530804
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Entry
121530804 CDS
T08357
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121530804 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121530804 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cclu02044
]
121530804 (sec31b)
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121530804 (sec31b)
Secretion system [BR:
cclu02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
121530804 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
WDR55
TPR_Sec16
Beta-prop_EML
Beta-prop_EIPR1
EIF3I
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_DCAF4
MukF_M
Prp18
Motif
Other DBs
NCBI-GeneID:
121530804
NCBI-ProteinID:
XP_041691985
LinkDB
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Position
31:45822199..45843008
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AA seq
1290 aa
AA seq
DB search
MRLKEIQRTAHPAWSPAPHHPICLALGTSAQQLDASFNTAAALEIFQVDFADPSLDMKLK
GSLPTSNRLHSLVWVNFGAGEDGLGGRLIGGSDNGMVTVYSPEAIVTSGAEAIIGQSDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFSNPMTPGTKSQLCEPPEDISVVSWNQ
QVQHILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQLVLASEDDRM
PVIQMWDLRFATSPLKVLENHTRGLLSIAWSQADPELLLSSAKDNRILCWNPNTGEVIYE
LPTTNQWCFDIQWCPRNPGLLSAASFDGWISVYSVMGGSLEAQQQRRADQSMCGTFPQIS
SSFDTMDPFGTGQVLPPLQVPQPTPQTTLVAPLKKPPKWVRRPVGASFAFGGKLITFGSP
KPPVQSPQPVPVPRQVFVSQVTTETEFLQRSRELQAALQSGSLSDYCQAKIHKAPTDSEQ
DIWRFLLVNFEDEARVKFLRLLGFSKEELERKISTCLGKNLQPNGHGVDANDLAEKIQLL
STQRSEESGDAVDSTKTPGSSSPSDFFSHIPPQPQDKEKISFQIPVSADADGLISQALLV
GNFEGAVDLCLNDGRYAEAILLAISGGEELLQKTQQTYLDKQRNSISMLISSVVTQNWGD
IVQSCELDNWKEALAALLTYAHPNEFAHLCDTLGSRLEGEGTEKRCLQACLCYICSGNIE
KLVECWALQRDCSSPLVLEDLVEKVMVLRKSIERLRSSEVALQSPVLADKLTHYAGLLAS
QGSLVTAMSYLPDASDQASIMMMRDRLFHAQAEGAAGRQQPPPFPYNIVSVTGGHPAPSQ
APAAPSQAQPPAQTTLTPGPHQPPLPVMPVVGQPQPPMTTVFTPQAATAHSRGPPPPSYG
GLPPSSHGPPASGLPPSSHGPPASGLPPSSHGPPPSGLPRTGIRPAYPQHPAAAPGFSPL
QPQQPMSAGLSAFAPGPTMPGSSLSGHPPGGLPTMPSPGLPPSGFTPTSLPSGPMPPSYQ
QPGAPVGMYPPGGSHLHSQGPPAGPPSGPYPPMGPGYPQGGPGAPAVKSFSAPSVAPPPT
GYFPWLSPPLVDDDAGQDGWNDPPAVRGGPRKKKGVPENYTPPAPITAPVMGGFPMEGPH
QPQGQQGHDPSRTQQFPPGAPQEPSVQLLQALPAERVEQREIPAEHMVLKQTFDSLVQRC
QLAAQDPQTKRKLDDASKRLGYLYDKLREQTLSTNILGGLHEISRCVSVQNYPRGLEVHT
AVVTSSNFSEIQAFMPILKVVMTIANKLAV
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaaagagatccagaggacggctcatccagcatggagtcctgccccccaccac
cctatctgcctggccttaggcacatcagcgcagcagttggacgcgtcattcaacaccgct
gccgccctggaaatattccaggtggattttgccgatccttccctggacatgaaactcaag
gggtccctacctacttctaacaggctgcatagtctggtgtgggtaaactttggagcagga
gaagacggtttgggagggagactgattggaggcagtgataatggcatggtaacggtgtac
agcccagaagccatcgtaacatcaggggcagaggcaataataggacagtctgacaaacac
actgggcctgtcagagcactagacttcaacccctttcagagtaatctgttggcgtcaggg
gcaaacgattcagagatctacatctgggatctgaacaatttcagcaatccaatgacacct
gggacaaagtcacagctctgtgagcctcctgaagatatcagtgtcgtgtcctggaaccaa
caggtccaacacatcctggcctctgccaaccccagtgggaaagcagtggtctgggacctg
aggaagaacgagcccatcatcaagattagtgaccacagcaacaggatgcactgttcaggg
atgctctggcaccctgaggtggccacacagttggtcctggcctccgaagatgaccgcatg
ccagttattcagatgtgggacctgcgcttcgccacgtcccctctcaaagtcctggagaac
cacacaaggggacttctgtccatagcgtggagccaagcagacccagagctgttgctcagt
agtgctaaagataacaggatcctctgctggaatccaaacactggagaggtgatctatgag
ttaccaacaaccaaccagtggtgctttgacatccagtggtgccccaggaacccagggctg
ctgtcggcagcctcgtttgacgggtggatcagtgtctacagcgtgatgggaggaagcctg
gaggcccagcagcagagaagggctgatcagtccatgtgtggtactttcccacagatctcc
tcgtcctttgacaccatggatccgtttgggacgggccaggtgctgccccctctgcaggtt
ccccaacccacccctcagaccaccctcgtcgctccgctgaagaagccccccaagtgggtg
cgcaggcccgtaggagcctcattcgcttttggtgggaagctgatcacatttgggagccct
aagcctccagtccagagcccacagcccgtccctgtccccaggcaggtgtttgtgagccag
gtcaccacggaaacagagttcctccagcgctccagagagctgcaggctgctctgcagtcc
ggctccttgtcagactactgccaggccaagatccacaaggccccaacagactctgaacag
gacatatggaggtttctcctggtcaactttgaagacgaagcccgggtcaaattcctgaga
cttctgggtttcagcaaagaggagttggagagaaagatatccacctgcttggggaagaac
ctgcagccgaacggacatggagtggatgccaacgatctggctgagaagatacagcttctc
tctactcagaggtcagaagagtccggtgatgcagtcgactccaccaagacccctggttca
tcctccccctcagactttttcagtcacatcccaccacaaccacaggacaaggagaagatc
agcttccaaatccctgtctcagcagatgcagacggtctgatcagccaggctctgctggtg
ggtaactttgagggagcggtggatctgtgtctgaacgacgggcgctacgctgaggccatc
ctgctggctatcagtggaggagaggagctactgcagaagacccagcagacatacctggac
aagcagaggaacagcatctccatgctgatctcatccgtggtgacccagaactggggagac
atcgtgcagagctgtgagttggataactggaaggaggctctcgccgctctcctaacctac
gctcaccccaacgagtttgctcatctgtgtgacaccctggggtcacgtctggagggtgag
gggacagagaaacgctgtctgcaggcatgtctctgttacatctgctctgggaacattgag
aaactagtggaatgctgggccctgcagagggactgctcctctcctctggttctagaggac
ttggtggagaaggtgatggtcctgcgtaagtctattgagcgtctgaggagcagtgaggtg
gcgctacagagtcctgtcctggctgacaagctgactcactatgctggtctcctggcctca
cagggcagcctggttacagcaatgtcctacctgccagacgcctcagaccaggcttccatc
atgatgatgagagaccggctgttccacgcccaggctgagggagcagcagggcgccaacag
cccccaccgttcccctacaacatagtcagtgtgacggggggccaccctgccccctcccag
gcccctgctgccccctcccaagcacaaccaccagcacagacaacactgacgccggggccc
caccagcctcctcttcctgtgatgccagtggttggccagcctcagcctcctatgactacc
gtgttcactcctcaagctgctactgctcactccagaggaccacctcctccttcatatggt
ggtctgccaccctcctcccatggtcctccagctagtggtctgccaccctcctcccatggt
cctccagctagtggtctgccaccctcctcccatggtcctccacctagtgggctgccacgg
acagggatacggccagcctacccccagcatcctgccgctgccccagggttctctccactc
cagccacaacagcccatgtctgcaggactctctgccttcgctccaggacccactatgcca
ggctccagcctgtctggacacccccctggcggcctccccaccatgcccagcccagggctt
cctccttcaggcttcacccccacctcgctcccctcaggccccatgccaccgagctaccag
cagcctggggcccccgtcggcatgtacccaccaggggggtctcaccttcacagccagggc
ccacctgcaggtcccccctctggcccatacccacccatgggacctgggtacccacaagga
ggtcctggagccccagccgtcaagtccttctctgctccctcggttgctcctcctcctaca
gggtacttcccttggctgagtcctccccttgttgacgatgatgcaggacaagacggctgg
aatgacccacctgcagtacgagggggtcccaggaagaaaaagggtgtcccagagaactac
actcctcctgctcccatcaccgcccctgttatggggggttttcccatggagggccctcat
caaccccaaggacagcagggccacgaccccagtcgcacccagcagttccccccaggggcc
cctcaggagcccagcgtacagctcctccaggcgctgccggctgagagggtggagcagaga
gagattcctgcagagcacatggtcctcaaacagaccttcgacagcctggttcaacgctgc
cagctagccgcacaagatccacaaacaaaaagaaaacttgacgatgcatcgaaacgcctt
gggtacctgtatgacaagctgagagagcaaacgctgtctaccaacatcctgggtggttta
catgagatcagtcgctgtgtgtctgtccagaactacccgcgtggcctagaggtccacact
gctgtggtcaccagcagcaacttcagcgagatccaagccttcatgcccatcctcaaagtg
gtcatgaccatcgccaacaagctggccgtctga
DBGET
integrated database retrieval system
