Coregonus clupeaformis (lake whitefish): 121530816
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Entry
121530816 CDS
T08357
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121530816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121530816
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121530816
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121530816
5.6.2.5 RNA 5'-3' helicase
121530816
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121530816
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121530816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
121530816
NCBI-ProteinID:
XP_041692016
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All DBs
Position
2:complement(15833194..15856922)
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AA seq
487 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNNGKPVEAVYGQSE
IHKKVLALNFRDCHTKIRHVDAHATLNEGVVVQVMGELSNDMQPMRKFMQTFVLAPEGTV
ANKFYVHNDVFRYQDEVFGDSDSEPPEESDEDVEEMEERVPSPEVAQEEAATFYEQTPCT
EAEGPVEEDAVTPEPEAEPEPEPEPDVVDGKQDLEPETQQQQDTTEEQGEKCPVTSPLPS
ATADPAPAPAAEDNRPFSWASVTSKNLPPSGPVPVSGVPPHVVKVPSAPPRVEVKTEAAA
QRTQPRDQRPREARPGPPPVNRGPRPGVREGEQGETSEVRRVVRYPDAHQLFVGNVPHDV
DKAELKEFFQQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILSNRPIKFRGDVRLNVE
EKKTRSAREGDRRDIRPRGQGGPGGPRERIGGPRGPPTRGGMAQKPSFGSGRGTGPSEGG
RYMGPRQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagctcgtcgggcgggagtttgtccgacagtactac
acactactcaaccaggcacccgactacctgcacaggttttatgggaagaactcctcctat
gtacatggaggtctggacaacaatggtaaaccagttgaagctgtctacggacagtcggag
atccataaaaaagtgttggcgctgaacttccgtgactgccacaccaagatcagacatgtg
gacgcccatgcgaccttgaacgagggcgttgtggtgcaagtgatgggggagctgtccaac
gacatgcagcccatgcgcaaattcatgcagacattcgtgctggcccctgagggcactgta
gcgaacaagttctacgttcacaatgatgtattccgttaccaagacgaagtgtttggggat
tctgactcagaaccccctgaagagtctgatgaggatgtggaagagatggaagagagagta
ccctcaccagaggtggcccaggaagaagctgcaaccttctacgaacagacaccctgcaca
gaggcagaggggccagtggaagaggatgctgtaaccccagagcctgaggctgaaccggag
ccggagccggagccagacgtggtggatggaaaacaggacctagagccagagacccagcag
caacaagacaccacagaggagcagggagagaagtgcccggtcacctcacccctgccctct
gccactgctgaccctgctcctgcgcccgccgctgaagacaaccggccgttctcctgggcg
tctgtcaccagtaagaaccttccccccagtggacctgtccctgtctcgggcgtcccccct
cacgtagtcaaagtcccgtcggcaccgcccagggtggaggtgaaaacagaagctgcagca
cagagaacacaaccgagagaccagagaccacgggaagcaaggccaggcccaccaccagtt
aacagaggaccccgaccaggagtgcgggaaggagagcagggagagacgtcggaggttcgc
cgtgttgtgcggtatccagacgctcaccagctctttgtaggaaacgtcccccatgatgtg
gacaaggcagagctcaaggagtttttccaacagtatggtactgtgcttgagctacggatc
aacagcggcggaaagcttcccaactttggattcgtggtgtttgacgattcggaacctgta
cagaaaatcctaagcaaccggcccattaagttcagaggagacgtccgactgaacgtggag
gaaaagaagactcgctctgcccgggaaggggaccggcgagacatccgccccaggggtcaa
ggtggccctggagggccccgagagaggataggagggcccagaggcccccccaccaggggt
ggcatggcacagaaacccagctttggctctggacgaggcactggacccagcgagggaggt
cgctacatgggacctcgtcagtga
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