Coregonus clupeaformis (lake whitefish): 121530829
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Entry
121530829 CDS
T08357
Name
(RefSeq) F-box only protein 11 isoform X1
KO
K10297
F-box protein 11
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121530829
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121530829
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
zf-UBR
F-box
Motif
Other DBs
NCBI-GeneID:
121530829
NCBI-ProteinID:
XP_041692071
LinkDB
All DBs
Position
1:complement(12787559..12808613)
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AA seq
916 aa
AA seq
DB search
MNSVRATNRRPRRVSRPRPVQPDRNEGDGADEEAPAAAAEVAVEESGPAAGNNPYQLRRK
SLMPKRTASSTAASCPSKTAMEGASTSTTEPFGHRAKRARVSGKSHDLPAAPAEQYLQQK
LPDEVVLKIFSYLLEQDLCQTACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPEPGKF
YQVSPEEHDHPNPWKDSFQQLYKGAHVKPGFAEHFYSNPGRFKGRENMLYYDTIEDALGG
VQEAHFDGLIFVHSGIYTDEWIYIESPITMIGAAPGKVSDKVVIENTRDSTFVFMEGSED
AYVGYMTIRFNPDDKAAQHHNAHHCLEITVNCSPNIDHCIIRSTCTVGSAVCVSGQGACP
TIKHCNISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVG
VFTFDHGMGYFESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIEN
KIYANNFAGVWITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIEGNDIHGNALAGIQIRT
NSCPIVRHNKIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSG
KQVGVYFYDNGHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGF
IEDNEIFDNAMAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGV
LISTNSHPVLRKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKVIL
CRFITLRSNESFTACVRRRWKQKTHNKIMNNQDAIEKAVSRGQCLYKISSYTSYPMHDFY
RCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGAGTLSNPCTLAGEPTHDTDT
LYDSAPPIESNTLQHN
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagccaccaaccggagacccaggcgagtctcaaggccgcgcccggtg
cagcccgaccggaacgagggggacggagcagatgaggaggctccagctgcagcagcggag
gtggctgtggaggagtccgggcctgcagctgggaacaacccctaccagctccgacgcaag
tctctaatgcccaagagaacagcctccagtacggcagcctcctgccccagcaagaccgct
atggagggagcatccacctcgacaacagaacccttcggtcatcgagccaaacgagccagg
gtctctggcaagagccacgacctgccagcggccccagcagagcagtacctgcagcagaag
cttccagatgaggttgttctgaagattttctcatatctcctggagcaagacctctgtcag
actgcctgcgtctgcaaacgcttcagcgagctagccaacgaccctatactctggaagcgt
ctgtacatggaggtgtttgagtacacacgtcccatgatgcaccctgagccaggcaagttc
taccaggtcagccccgaggaacacgaccaccccaacccctggaaggacagcttccaacaa
ctgtataaaggagcccatgtgaagccaggctttgctgaacatttctacagcaaccctggg
aggttcaaaggcagggagaatatgctgtactatgacaccatagaagatgcattaggaggg
gtgcaagaggctcattttgacgggctgatcttcgtccattctgggatttacactgacgag
tggatctacatagagtcccccatcaccatgattggtgcagctcctggtaaggtgtctgat
aaggtggtgattgagaacaccagagactcaacgtttgtcttcatggagggatcggaggac
gcctacgtgggatacatgaccatcaggtttaacccagatgataaggcagctcagcaccac
aacgcccaccactgtctggagatcactgtcaactgttctcccaacatagaccactgtatc
atcaggtctacctgcacagtgggctcggctgtgtgtgtgagcggccagggggcgtgtcct
accatcaaacactgcaacatcagcgactgtgagaatgttggactttacatcaccgaccat
gcacagggtatctatgaggataatgagatcagtaataatgcattggcgggaatctgggta
aaaaaccacggcaaccccatcatcagacgaaaccacatccaccacggccgagatgtagga
gtcttcaccttcgaccacggcatgggttattttgagagttgcaacatccacaggaatcgt
atagcaggctttgaggtgaaggcgtatgctaaccccacagtggttcgctgtgagatccac
catggccagacggggggcatttatgtgcatgagaaaggaagaggacagttcatagaaaac
aagatctacgccaacaacttcgctggagtttggatcacctccaacagcgaccctacaata
cggggcaatgcaatctttaacggtaaccaagggggcgtgtacatatttggcgatggccgt
ggcttgatcgaggggaacgatatccatggcaacgctctggcaggaatccaaatcagaacc
aacagctgcccgattgtacgccataacaagatccacgacggacagcacggcggcatctac
gtgcatgagaaaggccagggtgtgatagaggagaatgaggtgtacagcaacacgctggct
ggagtctgggtgaccaccggcagcacacctgtcctccgcaggaaccgcatccacagcggc
aaacaggtgggggtgtatttctatgacaacggtcatggggtgttggaagacaacgacatc
tacaatcacatgtactccggcgttcaaatacggacgggcagcaaccccaagatcagacgc
aacaagatctggggaggacaaaatggaggcatcctggtctacaactccggtctgggtttc
atcgaggacaatgagatctttgacaacgccatggcgggcgtgtggattaagacagacagc
aaccccacgctgcgacgcaacaagatccacgacgggagagatggcggcatctgtatcttc
aacggagggagaggtctcctggaggagaacgatatcttcaggaacgcccaggcaggagtt
ctgatcagcaccaacagccacccggtgctccgcaagaaccggatctttgacggcttcgct
gcaggtatcgagataaccaaccacgccacggcgactctggagggaaaccagatcttcaac
aaccgttttggaggcctgttcctcgcctctggggtcaacgtcaccatgaaagtcattctg
tgcagattcatcactctacgttctaacgagtccttcacagcttgtgtgcgtcgtagatgg
aaacagaagacacataataagataatgaataaccaggatgccatagagaaagctgtgagc
agaggacagtgtctctacaagatctccagctacacctcctaccccatgcacgacttctac
aggtgtcacacctgcaatacgacagaccggaacgccatctgtgtgaactgcatcaagaag
tgtcaccaaggacacgacgtggagtttatacggcatgataggtttttctgtgactgtgga
gcgggaactctgtccaacccctgtactctggctggagagccaacacacgacacagacaca
ctttacgactcagccccgcccatagagtccaacacactgcaacacaactga
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