Coregonus clupeaformis (lake whitefish): 121530844
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Entry
121530844 CDS
T08357
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121530844
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121530844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
121530844
NCBI-ProteinID:
XP_041692062
LinkDB
All DBs
Position
18:46147339..46176574
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AA seq
1478 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNGDVLKTAERLYRAAWITKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFLDGYKTLGFQESIYGEFLGRVRENPRLLASCLVAGERL
NQEHIQGVIYTVFTSLYGNCIMQEDERYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERFTPAQQERLFGEKGS
VGYRQKVAAAVEANEAKLVTLVNKFIGYLKQNTYCFPHNLRWIVSQMYKTLSCVERLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDGDP
RRKNSLAKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTVAYMTHSQLLCLVDFV
RSVMAGDHLREEEHMLLETLLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRNIG
QQLATSWDSTTTTLSAHIPLVTPFASRSRSRSELAQQGEAEASSLESLQEVMPEEVLVIS
LGSSPQTIPGMMSENEVLTMQLTDGSQGDTPADDTKHHGKPDKTLRFSLCSDNLEGISEG
PSNRSNSVSSLDMEGESVSELGAGPSGSNGVEALQLLEHEHATTQDNLDDKLRKFEIRDM
MGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGATVENMLGSLLCLPGSGSVL
LDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTEVREVSSR
PSTPGLSVVSATSEDRGKTEDLRSECSSDFGGKDSVTSPDGEESSHGGHHSLASPPSQAD
SLLAMFDPLSSGEGFSTGTIVRPKVYYARPLHPPPDPPIPEACALGQEPRYSLFTPHCLA
QGELEHTKQRYSYPDRLVRSRSSDIVCQGRRPTSDPGLNRRAAAEERDPAGAFSMGSPSS
PSKDSLKGEVEERKDSDEEKSDRNRPWWKKRFQSAIPKVLYWTAESEVPAPIAFRKRDRQ
EKDDVGHERVPQDDPLSRNSQAQAAEDILDKYRNIKRTSPSEGATAAAYDATGELCGEEG
LHDSPRDEALQNMSTDDLPDSASQTAQQHHSNKFSFSDAKKKLRLALCSADSVAFPLMAP
ATTRNGLPDHTDSEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSRFDARTCRKLL
AAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEH
MEAKSLDFIKAFQGCTASDDKTAAVEDFLRYLYGAMAHDAIWQYASEDQLQDAQMAIERS
VMNRIFKLAFYPNQDGDILRDQLLQEHIARLSKVVTANHKALQIPEVYAREAPWPSAQSE
IRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLS
TIQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcgactgtatgtg
gcttcagagaagcagctgatccagcggctcaacggggatgtgctgaagactgctgagagg
ctgtaccgtgctgcctggatcactaagcagcagaggatcaacctcgaccgtctcatcctc
accagtgctgaggcctccccggccgaatgctgccagcatgccaaagtgctggaggacacg
cagttcctggacggctacaagactctgggcttccaggagagcatctacggggagttcctg
ggtcgggtgcgcgagaacccccggctgttggcctcctgcctggtggctggggagaggctg
aaccaggagcacatacagggggtcatttacacggtcttcacctcactctatggcaactgt
atcatgcaggaggatgagcgctacctgctgcaggtcctccgctacttggtggagtttgag
ctgaaggagagcgacaaccctcggcggctgctgcggcggggcacgtgcgccttcagcatc
ctcttcaagctcttctccgaggggctgtactcagccaagcttttcctcaccgccaccctc
cacgagcccatcatgcagctgctggtggaggacgaggaccacctggagacggacccctcc
aaggtgacagagcgcttcacgccagcccagcaggagcgcctgtttggggagaagggctcg
gtgggctacaggcagaaggtggcggccgctgtggaggccaacgaggccaagctggtgacc
ctggtcaacaagttcatcggctacctgaagcagaacacctactgcttcccccacaacctg
cgctggatcgtgtctcagatgtacaagacgctgtcgtgcgtggaacggctggaggtgggc
gaggtgcgaaccatgtgcacggacctgctgctcacctgcttcatctgcccagccatagtc
aaccccgagcagtacggcatcatctcagacgcccctatcaacgaggtggcccgcttcaac
ctcatgcaggtagggcagcttcttcaacagttggcaatggctgacgatgatggagacccc
aggaggaaaaacagtttggcgaagttcgataagagctgtgtagctgccttcctggatgtg
gtaatcggagggagagctgtggagacaccgcccatgtcctccatgaacctactagaagga
ctcagcaggactgtggcgtacatgacacacagtcagctgctctgcctggtggactttgta
cggagtgtgatggcaggggaccacctccgggaggaggagcatatgctcctggagaccctg
ctggctaacgtgccccagtcccgcacggtgaagagcaacagtctggagctcaccccctcc
aacaccccacagctctccccagccactacccccgccaacaaaaaaaacaggaacatagga
caacagttagcaacttcctgggactccacaaccaccaccctgtctgctcacattccatta
gttaccccttttgcctcccgcagtcgtagccgttccgagctggcccagcagggggaggca
gaggctagctccctggagtccctgcaggaggtgatgccagaggaggtgctggtgatctca
ctaggaagcagcccccagaccatccctgggatgatgtcagagaatgaggtgttgaccatg
cagctgactgatggttcacaaggggacactcctgcagatgacaccaagcaccatggcaag
ccagacaaaaccctgcgcttctccctctgcagtgacaacctggagggcatctcagagggt
ccgtccaaccggtctaactctgtgtcgtctctggacatggagggagagtctgtgtctgag
ctgggagctgggccatcagggagcaatggggtggaggctctacaactgctggagcatgaa
catgccaccactcaggacaacctggatgacaaactgcgtaagtttgagatccgcgacatg
atgggcctgacagatgaccgggacatctctgagacagtgagtgagacctggagcacagac
gtgctgggcagtgactttgaccccaacatggatgaggatcgactgcaggaaatagctggg
gcaactgtagagaacatgctgggcagcctgctgtgcctaccaggctccggctcagtgctg
ctagacccctatggatccaccatctcagagaccaccagcgaggcctggagtgtggaggtc
ctgcccagtgactcagaagccccagacctgaagcaggaggagcgtctacaggagttggag
agctgctcagggctgggcagcacctccgatgacacagaggtcagagaggtcagctcccgg
cccagcaccccagggctcagcgtcgtctcagcgacatcagaagacagaggaaagacggag
gacctgcggtcggagtgcagctcggactttggggggaaggactctgtgaccagtccagat
ggggaggagtcgtcccacggaggacaccacagtttagcttctccgccctcacaggcagac
tccttactggccatgttcgatcccctatcctccggcgaaggtttctctactggtactatc
gtgaggcccaaagtgtactatgccaggccccttcatcctccccctgaccctcccatccca
gaggcctgtgccctgggccaggagccccgctactccctgttcacgccccactgcctagcc
caaggcgagctggagcacaccaagcagcgctactcctacccagacaggctggtacgtagc
cgcagctctgacattgtgtgccaaggccgccggcctaccagcgacccaggcctcaaccgc
agggctgcagccgaggagcgggaccctgccggggccttctctatggggtcaccctcgtcc
cccagcaaggactccctaaaaggagaggttgaggagcgaaaggacagtgatgaggaaaag
tctgatcgcaacagaccatggtggaagaaacgctttcagtcagccattcccaaagtgctg
tattggacggctgagagtgaagtcccagctccgatagccttccggaaaagggacaggcag
gagaaagacgatgtgggccatgaacgcgtcccacaagacgaccctctgtccaggaactcc
caggcccaggcagcagaagacatcctagacaagtacaggaacatcaagaggaccagcccc
agtgaaggagccaccgctgcagcctatgatgccacaggagagctgtgtggagaggagggt
ttgcacgactctcccagagacgaagctctgcagaacatgtccacagatgacctgccagac
tcagccagccagacggcccagcaacaccactccaacaagttctctttcagtgatgcaaag
aagaagttgagactggccttgtgttcagcagactctgtggctttccccctcatggctcct
gccaccacacgcaatgggctgcctgaccacacagactctgaagacaatgagatcgtgtgc
ttcctgaaggtccagctggcggaggccatcaacctgcaggataagaaccagatggcccag
atccaggagaccactcgctgcgtcagccgcttcgacgcacgtacctgcaggaagcttctg
gcagccatcgccgaggattacaggaagcgggcgccctacatagcatatctgacgcggtgt
cggcaaggcctgcagacgtcccaggcccacctggagcggctgctgcagcgggtgctgagg
gacaaggaggtggctaaccgctacttcaccactgtctgtgttcgcctcctactggaacac
atggaggctaagtcactggacttcatcaaagccttccaggggtgcacagcgtcagatgac
aagacggcggcggtggaggacttcctgcgctacctgtacggggccatggcccatgatgca
atctggcagtacgctagcgaggaccagctgcaggatgcccagatggccatcgagcgcagc
gtcatgaaccgtatcttcaaactggccttctaccccaaccaggacggggacatcctgaga
gaccagcttcttcaggaacacatagcgcgtctctcaaaagtggtgacggcaaatcacaaa
gctcttcaaatcccagaggtgtatgcgagggaggctccctggccgtctgcccagtcggag
atccggaccatcagcgcctacaagactcctcgggacaaagtgcagtgtatactgcgcatg
tgttccaccatcatgaacctcctgagtctggccaacgaggactctgtccccggagcagac
gactttgtccctgtgctcgtctttgtcctgataaaggcaaacccgccttgcctgctgtcc
actattcagtacatcaataatttctacgccagccggctgagtggggaggagtgctattgg
tggatgcagttcaccgcggcagtggaattcattaagaccatcgacgatcgcaagtga
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integrated database retrieval system
