KEGG   Coregonus clupeaformis (lake whitefish): 121530849
Entry
121530849         CDS       T08357                                 
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1-B isoform X1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121530849
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121530849
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    121530849
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121530849
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_RIG_2nd ANAPC4_WD40 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_Vps41 eIF2A NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_SCAP B-prop_COPA_B_2nd Beta-prop_DCAF12 Beta-prop_ELP1_1st RMC1_N
Other DBs
NCBI-GeneID: 121530849
NCBI-ProteinID: XP_041692069
LinkDB
Position
18:46048169..46050434
AA seq 333 aa
MKDTLALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGKEGDSWECKTVLQDGH
QRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLL
ATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEE
DDDWECRATLEGHTATVWGLTFDPSGQRLASCSDDRTVKIWKECQPEGGQEGTDAAWKCV
CTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETADPDQPVFSLSAHVPKAHTQ
DVNCIAWHPKEAGLLVSCSDNGEIAVWNYQSEV
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgaaggacactttggcccttctacagaaattcaacgctcatccagattcccgctgttgg
tatgttgcgtggaaccccaagggcacattgctggcctcatgtggtggtgaccgggccatt
cggatatggggaaaggaaggtgactcttgggaatgcaagacagtgctccaggatggacac
cagagaactgtcagaaaggtggcatggtccccatgtgggaactacctggcctcagcaagc
tttgatgccacaacctgcatctggaagaagaagaatgatgactttgagtgcttgactgtg
ttggaaggacatgagaatgaggtcaaatgtgtggcctgggccccatccggtaacctgctg
gccacatgtagcagagacaagagcgtctggatctgggaggtggatgaggaggatgagtat
gagtgtgtgagtgtggtaaactctcatacacaggatgtcaagcatgttgtctggcaccca
acacaggagctcctggcctcatgtagctacgacaacaatgtgtgtgtctataaagaagag
gatgatgactgggagtgcagggcaaccctggagggtcacacagccactgtctggggtttg
acctttgacccaagtggccagagactggcctcctgcagtgatgaccgtactgtgaagatc
tggaaagaatgtcagcctgaaggtgggcaggaaggcacagacgcggcttggaaatgtgtt
tgcaccctttcagggtttcatggacggacagtgtatgatattgcatggtgtccgttgact
ggtgccctggcgactgcatgtggtgatgacggagtgcgtgtgtttaaggaggatgagacc
gctgacccagaccagcctgttttctccctgtctgcccatgtacccaaggcccacacccag
gatgtcaactgtattgcctggcaccccaaggaggctgggctccttgtctcctgcagtgac
aacggggagatagcagtatggaactaccagtctgaggtctga

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