Coregonus clupeaformis (lake whitefish): 121530855
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Entry
121530855 CDS
T08357
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04382
Cornified envelope formation
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121530855
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121530855
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121530855
09158 Development and regeneration
04382 Cornified envelope formation
121530855
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121530855
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121530855
03036 Chromosome and associated proteins [BR:
cclu03036
]
121530855
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121530855
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121530855
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121530855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
121530855
NCBI-ProteinID:
XP_041692079
LinkDB
All DBs
Position
18:45848278..45868196
Genome browser
AA seq
447 aa
AA seq
DB search
MAGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEL
ESKSQPQCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYRDPTTVTKLRVPVFQPMDLMVEASPRRVFANAHTYH
INSISVNSDCETYLSADDLRINLWNLEITDRSFNIVDIKPANMEELTEVITAAEFHPNQC
NTFVYSSSKGTIRLCDMRASALCDQHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY
MMTRDYLTVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGYRQDVTLEASRESSKPRSVLKPRKVCTGGKRKKDEISVDSLDFNKKI
LHTAWHPQDNIIAVATTNNLYIFQDRL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagccggcggcgggggcaatgatgtgcagtggtgtttttctcaagtcaaagga
gcgattgatgacgatgtggctgaagctgacatcatatccactgtggaattcaatcactct
ggggagctactagccactggggacaaggggggccgcgttgtcatctttcagcaggagcta
gagagtaagagccagccacagtgccgtggagagtacaatgtttacagcaccttccagagc
cacgagcctgagttcgactacttgaagagccttgagatcgaggagaagatcaacaagatc
cggtggctgcctcagaagaacgctgcacagttcctcttgtccacgaatgataaaactata
aagctgtggaaaatcagtgaacgggacaagagaccagaggggtacaacctgaaggaagag
gatgggcgttacagagaccccaccaccgtcacaaaactacgggtcccagtgtttcagccc
atggacctgatggtggaggccagtcccagacgagtgtttgctaatgcacacacctaccac
atcaactccatctcggtcaacagcgactgtgagacctacctgtctgccgatgaccttcgc
atcaacctctggaacctggagatcactgaccgcagctttaacattgtggacatcaagcca
gctaacatggaggagttgacagaggtgattacagcagcagagttccatcctaaccagtgc
aacacctttgtctacagcagtagcaagggcaccatccggctctgtgacatgagagcatca
gctctctgtgaccagcactccaaactgtttgaagagcctgaggatccaagcaaccgctca
ttcttctctgagatcatctcctccatctctgatgtcaagttcagccacagtgggcgctac
atgatgaccagggactacctcaccgtcaaaatctgggacctcaacatggagtcccgtcca
gtagagacttatcaggttcatgaatacctcaggagtaaactgtgctcactctatgagaat
gactgcatctttgataagtttgagtgctgctggaatggaaatgacagtgttgtgatgaca
ggctcgtacaacaacttcttccggatgtttgaccgaggctaccggcaggatgtgaccctg
gaggcgtctcgggagagcagtaagcctcgctctgtgctcaagccccgcaaggtgtgcaca
ggtgggaaacgcaagaaggacgagatcagtgtagacagcctggactttaacaagaagatc
ctccacacggcctggcacccccaggacaacatcattgccgtggccaccactaacaacctc
tatatatttcaggacagactgtaa
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