Coregonus clupeaformis (lake whitefish): 121530874
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Entry
121530874 CDS
T08357
Name
(RefSeq) early growth response protein 3
KO
K12497
early growth response protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121530874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121530874
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
121530874
BRITE hierarchy
Motif
Pfam:
DUF3446
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2HC_2
zf-BED
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
121530874
NCBI-ProteinID:
XP_041692121
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All DBs
Position
18:47108395..47118249
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AA seq
420 aa
AA seq
DB search
MTGKLADKLPLTMSSLINTIPDSLYAEEDIPTSMNIFTNSDSINHYSQMNTDNIMDLGMG
SDKGTSEIQYGSNFQSNRSGQTVTYLGKFAFDTPSAGGIGGSGWCSDNNIISLVSAGILG
VSPSPGNITTQTSSSGASMGGQSSDMEQVYGPPLPAYSTCSDLYQDQVSFHHSPATSTAL
GYPGNDYHTTSKPSMDGSLFSMIPDYNLFHHQGEVGVMEHKPFQSMDPIRVNPPPITPLE
TIRAFKDKQQIHPGFMGGQQLAPQHHQPPQRLTLKPIRPRKYPNRPSKTPVHERPHACPA
ENCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCEFCG
RKFARSDERKRHARVHLKQKDKKPADKGSGAAGSHSSPPSSCGGSGGTSDGNIMTVTTCA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacagggaaactagcggacaagctccctcttaccatgagcagtttaataaacacgatt
cctgacagtctttacgcagaagaggacattccgacgtctatgaacattttcaccaattcg
gattctataaaccactactcgcaaatgaatacagataatatcatggatctggggatggga
agtgataagggaacctcggagatccagtacggctccaacttccagtccaaccgcagtggg
cagaccgtcacctatctggggaagtttgccttcgacactccttcggcgggtggaatcggg
ggctccggctggtgttcagacaacaatatcattagtttagtaagtgctgggatcctgggc
gtctccccgtcgcctggcaatatcaccacacagacgtcgtcctctggggccagcatgggc
ggccagtcctcagacatggagcaggtgtacggtccgccactgcccgcctattccacctgc
agtgacctgtaccaggaccaggtctccttccatcacagccctgccactagcactgccctc
ggctaccccggcaatgactatcacaccacctccaagccctccatggacgggagccttttc
tccatgatcccagactacaacctcttccatcatcagggtgaggttggcgtgatggagcac
aagcccttccagtccatggaccccattcgcgtcaaccccccacctatcacaccgctggag
accattcgagcattcaaagacaagcagcagattcatccaggtttcatgggtgggcagcag
cttgctcctcagcaccaccagccaccacagaggctaacactcaaaccaatccgaccacgg
aagtacccaaaccggcccagcaaaacccctgtgcatgagcggccacatgcctgcccagca
gaaaactgtgacagacgcttctcccgttcagatgaactgacacgccacctccgcatccac
acgggtcacaaacccttccagtgccgcatatgcatgcgctccttcagccgaagcgaccac
ctgaccacccacatccgcacgcacacgggcgagaagcccttctcctgtgagttctgtgga
cgcaagtttgcccggagtgacgagcgcaagagacatgccagagttcacctcaagcagaag
gacaagaagccggctgacaaggggagtggggcagctggcagccacagctcaccccccagt
tcctgtggtggcagtggaggaaccagcgatggcaacatcatgactgtcactacctgtgct
tag
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integrated database retrieval system