Coregonus clupeaformis (lake whitefish): 121530875
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Entry
121530875 CDS
T08357
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
cclu04216
Ferroptosis
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121530875
00071 Fatty acid degradation
121530875
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121530875
09143 Cell growth and death
04216 Ferroptosis
121530875
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121530875
03320 PPAR signaling pathway
121530875
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121530875
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121530875
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121530875
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121530875
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121530875
Exosomal proteins of breast cancer cells
121530875
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121530875
NCBI-ProteinID:
XP_045082831
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Position
18:complement(47163135..47187334)
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AA seq
718 aa
AA seq
DB search
MHFQEWLQSLHSSGGVRGPEREDFWSLLPSFPSSSSFSLSSLSLSPSSLLGIGALASLTA
YWLVTRPRPMRPPCDLNAQSIAVQGEPNWRRSALLKDDALLEFYYNDTRTAYDMFQRGLR
VAGNGPCLGFRKPGEPYQWISYTEVAEQAQVLGSGLLGKGCQPNPEQYVGIFAQNRPEWI
ISELACYTFSMAVVPLYDTLGEEAMVHILNLAEISLVICDKEEKAESLLGNKEKGATPTL
SCLVLFNACSDAIVERGKNCGVEILELKQLMVLGRQNLKDPVPPKPQDLAVVCFTSGTTG
KPKGAMITHGNIASNSSSVIKILEGSFFIRQEDVSISYLPLAHMFERMIQVSMFCHGARV
GFYQGDISLLMDDIKTLKPTFFPVVPRLLNRIYDKILGSVTSPLRRAVLHYAVRRKQAEL
SSGVVRNNSLWDRLVFNRIQANLGGNLRFILTASAPISPTVLSFLRATLGCLIFEGYGQT
ECTAGCTFSMPGDWSAGHVGAPLPCAMVKLVDIPDMNYYAKNGEGEICIRGHSVFRGYLK
DEEKTAEALDSDGWLHSGDVGQWLLNGTLRIIDRKKHIFKLSQGEYIAPERIENVYMRCV
PVLQVFVHGDSLKSHLIGIVVPDPEVFNDWVKERGIIGSYKELCQHPDVKKAVLEDMTAV
GKEAGLKSFEQVKDLHLHPEMFSVSNGLLTPTLKSRRVDIRRVFQEQITNMYSTTAIL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcaggagtggttacagtcccttcactccagtgggggggttcgaggacctgag
agggaggacttctggagccttctcccctctttcccttcgtcgtcctctttctccctctcc
tccctctctctgtccccctcctctctgctgggtataggggctctggcctccctcactgca
tactggctggtgacccgccctcggcccatgcgtcccccctgtgatctgaatgcccagtct
atcgctgtacagggagagcccaattggaggcgttcagctttgctcaaggacgatgccctg
ttggagttctactataatgacaccaggacagcctatgacatgttccagagaggattgagg
gtggcagggaacggcccatgccttggcttcaggaaacctggggaaccttaccagtggatc
tcctacactgaggtggctgaacaggcacaggtgctgggctctgggcttttgggcaaaggc
tgccaaccaaaccctgagcagtatgttggaatatttgctcagaacagaccagagtggatc
atttcagagctggcctgctacaccttctctatggccgtggtgcccctgtacgacacactc
ggagaggaggccatggtgcatatcctcaacctggcggagatctcactggtgatctgtgac
aaggaggagaaggcagagtcccttctggggaataaggagaaaggtgcgacacccactctc
tcctgtctggtactctttaatgcctgcagtgatgccatagtggagagggggaagaactgt
ggagtggagattctagaactcaaacagctgatggtacttggacgacagaacctcaaagat
cctgtgccaccgaaaccccaggacctggcagtcgtgtgcttcaccagtggaaccacagga
aagccgaagggagccatgatcacccacggcaacatcgcctccaactcctcctctgttatt
aagatcctggaggggtcattttttattcgtcaagaagacgtgtcaatctcttacttgcct
cttgcccacatgtttgagaggatgattcaggtgtccatgttctgtcatggggccagggta
ggattctaccagggggatatctccctgctcatggacgatataaagactctgaaacccact
ttcttcccagtggtgcctcgcctactcaaccgcatctacgacaagatcttaggctctgtg
acgtccccattgcgccgggcagtgctgcactatgcagtgaggaggaagcaggctgagctc
agcagtggggtggtacgtaacaacagtctgtgggacaggctggtattcaacaggattcag
gctaatttaggaggtaatctgaggttcatcctgaccgcctcggcccccatctcccccacc
gtgctctccttcctcagggccaccctcggctgtctgatcttcgagggttacgggcagact
gaatgcacagcaggctgcaccttctccatgccaggagactggagtgcaggccatgttggc
gctcccctgccctgtgcaatggtgaagttggttgacatccctgatatgaactattatgcc
aagaacggagaaggagagatctgtatccgtggccacagtgtgttccgggggtacctgaag
gatgaggagaaaacagcagaggccctggatagtgatggctggctgcacagtggagacgtg
ggccagtggctactgaacgggacacttcgcatcatagacaggaagaagcacatcttcaag
ctgtcccagggagagtacattgcccctgaaaggattgagaacgtctacatgcgttgtgtc
cctgtgctacaggtgtttgtgcatggtgacagcctaaagtctcacctgattggtattgtt
gtgccagacccagaagtgtttaatgactgggttaaggagaggggaataataggatcctac
aaggagctctgccagcatccagatgtgaagaaagcagtgttagaagacatgacagccgta
gggaaggaagctgggctgaagtcttttgagcaggtgaaggacctgcacctgcatccagag
atgttcagtgttagcaacggcctcctcacccccactctgaagagcagacgagtggacatc
cgcagggtcttccaggaacagatcacaaacatgtacagcacaacagccatcttgtag
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