Coregonus clupeaformis (lake whitefish): 121530892
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Entry
121530892 CDS
T08357
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121530892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121530892
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121530892
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
121530892
NCBI-ProteinID:
XP_041692171
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Position
18:complement(47804881..47883524)
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AA seq
372 aa
AA seq
DB search
MALTVNLIGPSPWGFRIYGGRDFKKAITISKVNGGSKAELAALQPGDVILEINGENTVDM
LNVEAQNKIKNSKTQLQLLVERPDAPSPEQTNGTTTPEQLTGRFQEAVLVSRDENQNYRE
YSISSPASLSPGPYSPEPPSSPEGKRERLTPTSTKSIQLCSLSPEEKTSSYRLSRPLSQE
FSSSDFRRNSVSSRTPTPPGCYSPHSPVDCELSVSPRRSSSSSDFAMQRFDRDSEVYKMI
QENKESRTAPRQSNTFRMLQEVLEADEKEAAVRFPGLSPKPTPPKPTSPGGGVPKYHTCE
KCGTSIVTQVVRIMDDRFRHPECYTCSTPECGLNLKMRGHFWVGEEMFCEKHAHENYQGL
GTAPRATISPRH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacagtgaacctgattggtccgtctccatgggggtttagaatatatggagga
agagacttcaagaaggcgataaccatttccaaggtcaacgggggaagcaaagccgagctg
gctgccctgcagcctggtgatgtcatcctggagatcaatggagagaacacagtggacatg
ctcaatgtggaggcccagaacaagatcaaaaactccaagactcaactgcagctgctggtg
gagaggcctgatgcccccagccctgaacagaccaatggaaccaccaccccagaacagctc
actggacgcttccaggaagcggtgctggtgagtcgagatgagaaccagaactacagagag
tactccatctccagcccagcctccctgtcacctggaccctactcccctgagcccccctcc
agccctgaggggaagagagagcggctcacacccaccagcaccaagagcatccagctgtgt
tcattgtctccagaagagaagacgtctagttacagactgtccagaccactgtcacaggag
ttctcctcttcagacttcaggagaaactctgtatccagtcgaacccccacccctccagga
tgctactcaccccacagccctgtcgactgcgagctgtctgtctcccccagacgcagcagt
tccagctctgactttgccatgcagaggtttgaccgggattcagaggtctacaagatgatc
caggagaacaaggagtctcgcacggcccctcgacagtccaacaccttccgcatgctgcag
gaggttctggaggccgatgagaaggaggcagccgtgcggttcccagggctctcccccaaa
cccacccccccaaaacccacatctcccgggggcggagtccccaagtaccacacctgtgag
aagtgtggcaccagcattgttacacaggtggtgcgcattatggacgaccgcttccgccac
ccagagtgctacacctgttctacaccagagtgtggtctcaacctgaagatgcgaggtcac
ttctgggtgggagaggagatgttctgtgagaagcatgcccacgagaattaccagggcctt
ggcactgccccgcgtgccaccatctcgccccgccactga
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