Coregonus clupeaformis (lake whitefish): 121530910
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Entry
121530910 CDS
T08357
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121530910
Cilium and associated proteins [BR:
cclu03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
121530910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
RPN7
TPR_16
TPR_14
TPR_NPHP3
TPR_6
PUB
TPR_9
TPR_19
HlyE
AP4E_app_platf
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
121530910
NCBI-ProteinID:
XP_041692210
LinkDB
All DBs
Position
18:complement(49041437..49288753)
Genome browser
AA seq
2378 aa
AA seq
DB search
MMKWQPRKKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRES
LEPTYQQLQKMKLDKSPFVVVSVIGQELLTAAHHTASVVVLEAALKIGTCSLKLRGSVFS
ALSSAHWSLGNAEKSTGYMQQDLEVSKSLGDQTGECRAHGNLGSAFFSKGNYREALTNHR
HQLVLAMKLKDREAASMALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELG
NMGAVYIAMGDFENAVQCHEQHLGIAKALTNKREEARAYSNLGSAYHYHRNFDKAMSYHT
HVLELAQELEEQPIEMRAYAGLGHAARCMQDLDRAKQYHEQQLAIAEGLKDRAAEGRASS
NLGIIHQMKGDYETALKLHKTHLSITQELSDYAAQGRAYGNMGNAYNALGAFDQAVRYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALG
NLGNFHCSRGEFPQAVPYYEQYLRLSPDLQDMESEGKVCHNLGYAHYCLGSYQDAVKYYE
QDLALAKDLHDKLSQAKAYCNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALG
NLGDIFVCRKDVTGAIQFYEQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHT
QELEVYQELGDVPGECKAHGHLAAVYMALGKYAMAFKSYEEQLELGHRLKDPGVEAQVYG
NMGITKMNVGVMEEAIGYLEQQLATLQQLSGNEAVLDRGRAYGNLGDCYEALGDFEEAIK
YYDQYLSVAQSLNRMQDQEKAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQ
AYGELGALHSQLGNYEQAISCLERQLGIARDTQDRSLEGDASCGLGVVYQSMGEYETALR
CHQSDLEIAEETGSPARQGRAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTL
AYGSLGRTHHALQNYSQAVMYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQH
QLYRASALFETIRHEAQHSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTR
AFADLLVERQTGQQDSDPYTPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGIL
KFHEVYLGEGVTEGGPDLHEGGGGGVASGSSLEQHIASAREALGVESYYSRGCSSSETES
EAGDLLDQQFEELNNKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGCSS
LPCRPSSLNKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGS
SSNEYLYERFSLIAVPSIRGLGTSSKGHSRRAGPASCGGVSMAAVVGNPRLPSSVMDRWL
WGPMPSAEEEALMVSELLGCHPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTP
NPESIPGVAGAGVGNGGRGAGGGKRGSGGRGRKGSFGSSYTIPESLHLQDDGSDVESICD
SPPLQEFLLTAADILDLRLPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSL
WPVPVSASKVFVHAFYTALLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKL
NSPSSLIGQALAEILQYPERARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGG
VPGWHALLTAVGFRLDSAGTGIPAAVFFPTADPGDRLQQCSTTLQSILGLPPPALQALCK
LITASEAGEQLINRAVKNMVAMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHE
FLAALGFDLCEVGQEEVVLKTGKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLES
LASAQFVSNPLPLGYPNLPFSPPCLDNLASDAISVYSLSSVASTMSFASKSECDFLGHRQ
RGGATAHFSAHKHPHVPRSRSSPHGAATAAGGGRGDDEEYEGFSIISSEPLGSHCDSLPL
PPGHGQRHLHRGGRGVVGSSSSAAGRGYQVSVSSRGSVSTPTSPVKTSLVPITNTPLQKV
PGKVSSSDTGESDQSSTETDSTVKSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAG
AEGSAAGATSARSSAFRSSETSAFSRPSSSASVRTQSSPRPKPPSRSSSLQKISSGYNSP
AASETSLKDGSHPSPTLDSHAQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPA
LSYSSTGSACSSPADAPDLDRLRRGVIDEKVVAIHNLKTFWANTASQQQQQHLGPVRALR
GAPGPLVSAKRDVLSLLNLSPRHCSPSNAQNSLELRELGLQSLDRGNKNPSNGHNPRKVA
PSPTISTSSSPGARSIRLPAGNGYKFLSSGRFFPSSKC
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatggcagccccggaagaaggcatacttccgacagggtgttgcccttcagtac
cttggtcgccatgccgacgcgttggccgccttcgcgtcagggctggcccaagaccccaag
agcctgcagctactggtgggcatggtggaggcggccatgaagtcgccactacgagagtcc
ctggaacccacctaccaacagctgcagaagatgaagctggacaagagtccattcgtggtg
gtgtcagtgattggtcaggagctgctgacggcggcccaccacaccgcctccgtagtggtc
ctggaggccgcgttaaagatcggtacctgcagcctcaagctgcgcggctctgtattctca
gccctcagcagcgcccactggtccctgggcaatgcagagaagagcaccggatacatgcag
caagacctagaggtttccaagtcactaggtgaccaaacaggtgaatgccgtgcccatggc
aacctgggctcagcattcttctccaaggggaactaccgcgaggccctgaccaaccaccgc
caccagctggtcctggctatgaagctcaaggacagggaggcagcttctatggccctgagc
agcttgggtcatgtgtatacagccatcggggactaccctaatgccctggccagccacaag
cagtgtgtcctactggccaagcagtctaaggaccagctgtcagaggcacgggagctgggc
aacatgggcgccgtctacattgctatgggcgactttgaaaacgctgtacaatgccatgag
cagcacctgggcatcgccaaggccctgaccaacaagagggaggaggcccgtgcctacagc
aacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccacacc
catgtgctggagctggcccaggagctggaggagcagcctatagagatgagggcgtacgct
gggctgggtcacgctgcacgctgcatgcaggacctggatagagccaagcagtaccatgaa
cagcagctggccatcgctgagggcctgaaggacagggctgcagagggaagagcctcctcc
aacctgggcattatccaccagatgaaaggagactatgagactgcactgaaactccacaaa
acccacctctccatcacccaggagctcagtgactatgctgcccaaggccgggcctacggt
aacatgggcaacgcctacaacgcgctgggggcctttgaccaggccgtacgctaccaccgc
caggagttacagatctccatggaggtcaatgaccgggcctcccaagcctccacccatggt
aacctggccgtggcctaccaggccctgggggcccacgaccgcgccctgcagcactaccag
aaccaccttaatatcgcccgtgagctgcgagacgtccagagcgaggctcgcgccctcggc
aacctggggaacttccactgctcccggggagagtttccccaagccgtgccctactacgag
cagtacctccgcttgtcccctgacctccaggacatggagagtgaggggaaagtctgccac
aacttgggctacgcccactactgcctgggaagctaccaggacgctgtcaagtactatgag
caggacctggctctggctaaggacctgcatgacaagctgagccaggccaaggcctactgt
aacctgggactggccttcaaggctctgggtgacttcaccaaggcagaggagtgtcagaag
tacctgctctctctagcccagtctcttaataatgcacaggcccgcttcagagccctggga
aacctgggggacatctttgtctgcaggaaggatgtgaccggagctatccagttctatgag
cagcagctcgccctggctcaccaggtgaaggagcgcaggatggaggcgtgtgcctatgct
gccctgggtgccacctacagactggtgcagaagtacgacaaggcgctgggctaccacacc
caggagctggaggtgtaccaggagctgggcgatgtgcccggggagtgtaaagcccacggc
cacctggcagccgtctacatggctctggggaagtacgccatggccttcaagagctacgag
gagcagctagagctgggccacagactgaaggacccgggggtagaggcccaggtctacggc
aacatgggcatcaccaagatgaacgtaggggtgatggaggaggctataggctacctggag
cagcagctggccaccctccagcagctgagtggcaacgaggccgtgctggaccggggtagg
gcctatggtaacctgggagactgttacgaggccctaggggactttgaagaggccattaaa
tactatgaccagtacctttctgtggcccagagcctgaaccgcatgcaggaccaggagaag
gcctaccgaggcctggggaatggacacagggcgatgggtaacctgcagcagtccctggtg
tgttttgagaagcgtctggtggtggcccatgagctgggggagtgtggagggaaggcccag
gcttacggagagctgggggcgctccacagccagctggggaactatgaacaggccatctcc
tgtctggagcgccagctaggcattgcccgcgacacccaggaccgatcactagagggcgac
gccagctgcggcctgggtgtggtctaccagtccatgggagagtatgagacggccctgcgc
tgccaccagagtgacctggagatcgcagaggagacgggcagtcccgcccgacagggccgt
gcctatggcaacctgggcctcacctatgagtcgctaggcaactatgagcgtgcagtggtg
ttccaggagcagcatctgagtgttgcagctcagaccaacgacctggcggccaagaccctg
gcctacggcagcctggggaggacacaccacgcactgcagaactactcacaggctgtcatg
tacctgcaggaaggcctacgactggcagagcagctggctcggcgtgaggacgaggctaag
atccgccatcgtctggggctgtctctgtgggccagtgggaacctggaggaggcccagcac
cagctctaccgagcatctgcgttgtttgagaccattcgtcatgaggcccagcacagcacc
gactacaaactgtctctgtttgacctgcagacctcctcctaccaggcactccagagggtc
cttgtcagcctaggccaccatgacgaggcattggcggtggcagagcggggtcggacgcgg
gcctttgctgacctgctggtggagaggcagacaggccagcaggactcagatccctacacc
ccagtcacagtggagcacatcctggacacggtgaacagccagagggccctggtgctctac
ttctccatggctgctgggtacctgtacagctggctcctggctccaggagcaggcatcttg
aagttccatgaggtgtacttgggagagggcgtgacagagggcgggccagacctccatgag
ggtgggggagggggtgtggccagcggctcgtctctggagcagcacattgccagtgctcgg
gaggccctgggagtagagtcctactacagcaggggttgttctagcagtgagacagagagt
gaggcaggggacctgttggaccagcagtttgaggagctcaacaacaaactcaactctgtg
actgaccccacaggctttctccgcatggtgtccagaaacaacctgttcaacaggagctgc
cagagtatgactagcctgttcagtaacaccatgtccccagccaaagatggctgctcctct
ctgccctgccgacccagcagcctcaacaaacctcctctccgtgccctctacgacctgctc
atcgcacccatggaagggggcctgatgcactccagtggtcctgtgggcagacacagacag
ctgatattggtgttggagggggagttgtacctcatcccctttgccctgctgaagggaagc
tcctctaatgagtacctgtatgaacgcttcagcctcatcgctgtgccttccatccggggc
ctggggaccagctccaagggtcattctcggcgggcggggccggcttcctgtgggggcgtg
tccatggcagctgtggtgggtaaccctcgtctgccgtcctctgtgatggaccgctggctg
tgggggcccatgccctcagccgaggaggaggccctcatggtgtctgagctgctgggctgc
catccactggctggatcctctgccaccaaggagagggtgatgagtgccctcacccaggct
gagtgtgcccacttcgctacccacatctcctggaagctggccgccctggtgctcacgccc
aacccagagagcatacccggcgtggcaggggcgggtgtggggaatggagggagaggggca
gggggcgggaagagaggcagcggaggcaggggcaggaagggctcgtttgggagcagctac
accatcccagagagcctgcacctgcaggatgatgggagcgacgtggagagtatctgtgac
agccctcccctgcaggagttcctgctcaccgctgctgacatacttgacctgaggcttcct
gtcaaactggtggtgctggggtcataccaggagtccagcagtaaggtgacagcagacggt
gtggtaggtctgaccagggccttcctggctgctggggcccagtgtgtcctggtgtctctg
tggcctgttcctgtctcagcctctaaagtgtttgtccatgcgttctacaccgccctgctc
aacgggaccaaggccagcgctgctctcgcagacgccatgaagactgtccagagcagcaag
cagtactcccacccctccaactgggcaggctacatgctgattggtaatgatgtgaagctg
aacagcccctcatccctgattggccaggctctagcagagatcctacagtatccagagaga
gcacgggatgctctgcgggtcttactgcacctggtggagaagtctctccagaggattcag
aacggccagcgtaactccatgtacacgtcccagcagagtgtggagaacaaggtggggggc
gtcccaggctggcatgccctgctgaccgctgtgggcttccgcctggactcggctggcacc
ggcatccctgctgctgtcttcttccccacagcagaccctggagacaggctacagcagtgt
agcaccaccctgcagtcaatacttggtctaccgcccccagctctccaagccctgtgtaaa
ctcatcaccgcctctgaggcaggagagcagctcatcaaccgggctgttaaaaatatggtg
gcaatgctccaccaggtgctggtccagcttcagacaggggagaaggagcaggacttctct
ctgctgcccatccaagtgtccatcagtgtgcagctctggagactgccaggctgccatgaa
tttctggctgcactaggattcgacctgtgtgaggtggggcaggaggaggtggtactgaag
acgggcaagcaagccaaccgccgcaccatgcactttgccctccagtccctgctggcactg
tttgactctacagagctgccaaagcgtctcagcctggacagctcgtcctccctggagtct
ctggcctctgcccagtttgtctccaaccccctaccactgggctaccccaacctgcccttc
tccccaccctgcctggacaatctggcctcagacgccatctccgtctacagcctgagctcc
gtggcctccaccatgagctttgcctccaagtcagagtgtgacttcctgggccatcgacag
cgtggtggggccacagcacacttctctgcccacaagcacccgcacgttccccgcagtcgc
tcctctcctcacggggcggctacagcagcaggagggggacggggagatgacgaggagtat
gaaggcttctccatcatcagcagtgagcctctgggaagccactgtgactccctgcctcta
cctccgggtcacggccagcgccacctccaccgcgggggcaggggtgttgtcggtagttcc
agctcggccgctgggcggggttaccaggtgtctgtgtcgtcacgaggcagtgtcagcacc
cctacctcccctgtcaagaccagcctggttcccatcaccaacactcctctccagaaggtg
ccaggcaaggtgagcagctcagacacaggtgagtcggaccagtccagcactgagacagac
agcaccgtcaagtcccaggaggagaagactgtccctctggacccccaggagctggcccag
aagatcctggaggagacccagagccacctgcgggcggtggggagtttacaacgggctggg
gctgaggggtctgcagctggagccacctcagccaggagctctgccttccgctcctcagag
accagcgccttcagccgtcccagcagcagcgccagtgtccgcacccagtcctccccacga
cccaaacctccctcccgctcttcctccctgcagaagatcagctctggttacaacagccct
gcagcctcggagacctccctaaaggatggcagtcacccctcccctaccctggacagccac
gcccagttcaagctcaaataccccagctccccctatagtggtcacatctcccgctctccc
agtaacgtgtcgcccagctctggccaccagtccccggctggcagtgccccatccccagct
ctctcctactcctccacgggctctgcctgctccagccctgccgatgccccagacctggac
cgcctcaggaggggcgtcatcgatgagaaggttgtggccatccacaacctgaagacattc
tgggccaacacagcgtcccagcaacagcagcagcatctgggtccagtccgggctctccgt
ggcgccccaggacccctggtctctgccaagagagatgtgctgagccttctgaacctctct
ccacgacactgctcccccagcaacgcccaaaacagcctggagctgcgggagcttgggctg
cagtcgctggacaggggcaacaagaacccttccaacggtcacaatcctagaaaggtggcc
ccctctcccactatttccactagcagcagccctggtgctcgctctatcagactacctgcc
ggcaatggatacaagttcctctcctctggcaggtttttcccatcctccaaatgctga
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integrated database retrieval system
