KEGG   Coregonus clupeaformis (lake whitefish): 121530920
Entry
121530920         CDS       T08357                                 
Name
(RefSeq) rab5 GDP/GTP exchange factor
  KO
K20131  Rab5 GDP/GTP exchange factor
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    121530920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121530920
Membrane trafficking [BR:cclu04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    121530920
 Protein recycling
   Other Rab GTPase associated proteins
    121530920
SSDB
Motif
Pfam: VPS9 zf-A20 DUF5601 ATP_sub_h
Other DBs
NCBI-GeneID: 121530920
NCBI-ProteinID: XP_041692228
LinkDB
Position
18:49590762..49595538
AA seq 474 aa
MAAEQQRGIRVTQAELLCKDACGYYGNPAWQGFCSKCWRERTRKEEAVRQETGPHNDAGS
PLTFSKFEEKKNMEKGRKVNTMRRLFWGGPSPPKRPESSEGQAATLKAYQSIEPGDFTSF
LKLLRNPSSQRLQSRCTAFLNTMEAYHGLPVQKQSDLVQDFYQNIAVHFSSLSEVQVSQM
MEHIEKLIMTRLHKWVFCHDSCDDEVKDLALQRRIRSLNWVTPHMLRVPFPDERAEVVSD
PFLPAITAIIEMDAKRAPQDKLTCICKCSQNVFQALSTSNSEPANADDFLSGLIYVVLKA
NPPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLCCAVAFIEKLDGPALNLSPEEFEGYMQ
GRRAPSKRGSERQKMARETQDQLEDLKGRQEKVDQGMNALKEQLQHWVQSVQAQIDEVTS
QSALAQEEIKAQSELFQSHSLSILTQADDVKDQSVLLLEGKESNNNTCLTETEC
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggcggcggagcagcaaagagggatccgagtcactcaagcagagcttctctgcaaggat
gcgtgtggttattatggtaaccctgcatggcagggcttttgctccaagtgctggcgagaa
cgaacccgcaaagaagaggctgtcaggcaggagactgggccccacaatgatgcaggttct
cccctcaccttttccaaatttgaggagaagaagaatatggagaagggtcgcaaagttaac
acgatgaggaggctcttctggggtggaccgtcccctcctaaacgcccagagtcttcagag
ggccaggcggctacattaaaagcctatcagagcattgagccaggggactttaccagcttc
ctgaagctgctgaggaacccatcctctcagcgtctgcagtcccgttgcaccgctttcctc
aacaccatggaggcttaccatggcctgccagtgcagaagcaatctgaccttgttcaagac
ttttaccagaacatcgctgtgcatttcagtagtctgtcagaggttcaggtctctcagatg
atggagcacattgagaagctgatcatgacgcgtctgcataagtgggtgttctgccatgac
agctgtgacgatgaagtgaaagacttggcactccagaggaggatacggtccttaaactgg
gtcaccccccacatgctgagggtgcctttccctgatgagagggccgaggttgtcagcgat
ccctttctacctgctataacagccataatcgagatggatgccaagcgagcgccacaggac
aagcttacatgcatatgtaagtgcagtcagaatgtcttccaggctctctccacttctaat
agtgagccagcaaatgctgacgacttcctgtctggcctgatttacgtggtactaaaggcc
aacccaccccggcttcactccaacatgcagtatgtgatccgcttcggcctaccacacagc
ctgatggcaggagagagtggctactacttcaccaatttgtgttgcgcagtggccttcatt
gagaagctggatggaccagcactcaaccttagcccagaggagtttgaggggtacatgcag
ggtcgccgtgctccctccaagaggggcagtgagaggcaaaagatggccagggagacgcaa
gaccaactagaggacctgaagggccgacaggagaaggtggaccaaggaatgaacgccctc
aaagagcagttacagcattgggtacagtcagtccaggcacagatagatgaggtaacatcc
cagtctgctctggcacaagaagaaattaaagcccagtcagagttatttcaaagccattct
ctctctattctaacacaggcagatgatgtcaaagaccagtcagtgctgttgctagagggt
aaagagtccaacaacaacacttgtctaacagagactgagtgttag

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