Coregonus clupeaformis (lake whitefish): 121530932
Help
Entry
121530932 CDS
T08357
Symbol
hip1rb
Name
(RefSeq) huntingtin interacting protein 1 related b isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121530932 (hip1rb)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
121530932 (hip1rb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
121530932
NCBI-ProteinID:
XP_041692254
LinkDB
All DBs
Position
18:49972502..49998913
Genome browser
AA seq
1068 aa
AA seq
DB search
MNSIRQVPSRVKTKRTETNLGAEREHFDKQQLSSISKAINSNEAPVKEKHARRIILGTHR
EKGAFTFWSYALGLPLSSNSILSWKFCHVVHKVLRDGHHNSLQDCMRHHSNIVETGQLWG
NLHDRYGQLVALYAKLLCTKMEFHMKHSEIRANLEVTDEVLERVAGTDINNVFQLTVEVF
DYLDTELRLAETVIRQLNTSIAISTLTSGQCRLSPLIQVIQDCSHLYHFTVKLLFKLHAC
LPADTLQGHRDRFHDQFHSLKTFFNKARDMMYFKRLIQIPKLPESPPNFLHAASLAKHAR
PVVVIPDEDEPEQVDDDDDDPEPLINVSDVTMPSMTVPQQFDIFDQTFGPANGGFDDRDI
QIENLKRDFELLRADLERVKGEAQRYITQLKSQINSLEAELEEQRVQKQRALVENEQLRM
ELEATRRRNAEHESVQATFGEAETRAQATEQRYNKLKEKHTELVSSHAELLRKSADTVKM
LSATQQTQEEVERTKQQLAFEVDRIKQDADMKLEEQKFEMEKLKREFEEKKAEVERVKGT
LQSNEKVGEQLTRSMSALQAEKERLMHSVSEKEAALSSLRHAAQLQQSSLQQERERSTRE
LGELQGRLQEKSSREEQLQQKLLDEQFSLLQGTVSEAESIIQDAVAKLDDPLHIRCTSSP
DYLVSRAEATLGSIDKVTKGHSDYRTNMRDAGGLLRALTQFSHLAADTIINGSATAHMAP
TDHADRLTENCRGCATQSLQFLKDLKSKASLQRADPASIRIVVQKILRLGEELRPKGMDV
RQDELGDLVDKEMAATSAAIEEAVRRIDEMMNQARKDTSGVKLEVNERILYSCTDLMKAI
HLLVLTSTDLQKEIVEGGRGAATIKEFYARNSRWTEGLISASKAVGWGATQMVESADKVV
LHTGKYEELIVCSHEIAASTAQLVASSKVKADRNSTKLTALQQASRRVNEMAANVVASTK
TGQEHLEDKDTMDFSGMSLIKLKMEEMESQVKVLELENQLGNERLRLGELRKKHYDIAGV
PAADLSEGNGLAPSSASEPSSPKPSKPSIMRKPALAQKPNLPPKNMFR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgaattccatacgacaggtgccttcaagggtaaaaaccaaaaggaccgaaaccaattta
ggtgcggagagggaacattttgataagcagcagctcagcagcatcagcaaagccataaac
tccaatgaggcgcctgtgaaggagaaacatgcacgcaggatcattctggggacccacagg
gagaagggagcctttaccttctggtcctacgccttgggcctccccttgtccagcaactcc
atcctcagctggaagttctgtcacgtggtgcacaaagtcctgcgggacggccaccataac
agccttcaggactgcatgagacatcacagtaacatagttgagacggggcaactatggggc
aaccttcatgacagatatggccagctggtggctctgtatgctaagctcctctgcacaaag
atggagttccacatgaagcattctgaaatccgagccaacctagaggtaacagatgaggtt
ctggagcgcgttgcaggaacagacatcaataatgtgttccagctcactgtggaagtgttt
gattacctggatacagagctgaggctagccgagacagtgatccggcagctcaacacgtcc
attgccatctctacgctgacgtcaggccagtgtcgactgtcccccctcatccaggtcatt
caggactgcagtcacctctaccacttcaccgtcaagctgctcttcaagctgcacgcatgt
ctcccagcagacaccctgcaaggacaccgtgatcgtttccatgaccagttccacagcctc
aagaccttcttcaacaaagccagagacatgatgtacttcaagagactcatccagatcccc
aagctgccagaatcccctcctaacttcctgcatgcggcttccctggccaagcatgcgagg
ccggtggtggtcatcccagacgaggatgagcccgagcaggtggatgatgacgatgacgac
cctgagccgctgatcaatgtcagtgacgtcaccatgcccagcatgacggtgccacagcag
ttcgacatatttgatcaaaccttcggacctgccaatggtggttttgatgacagggatatc
cagattgagaacctcaagcgggacttcgagctattgagggcagatctggaaagggtcaaa
ggagaggcccagcgctacatcacccagctcaagtcccagatcaacagtctggaggcggag
ctggaggagcagcgggtgcagaaacagcgtgcccttgtggagaacgagcagctgcgcatg
gagctggaggccacgcgccgccgcaacgctgagcacgagagcgtgcaggccaccttcgga
gaggccgagacgagagcccaggccacagagcagcgctataacaagctgaaggagaagcac
actgagctagtgtccagccatgcggaattgctcaggaagagtgcagacacagtgaagatg
ttgtcggccacccagcagacccaggaggaggtggagaggaccaagcagcagctggctttt
gaggtggatcgcatcaaacaggacgctgacatgaagcttgaggagcagaagtttgagatg
gagaagcttaaaagggagtttgaggagaagaaggcagaagtggaacgtgtcaaaggcact
ctgcagagcaacgagaaggtgggggagcagctgaccagatccatgtctgcgctgcaggcg
gagaaggagcgtctgatgcactctgtgagtgagaaggaggcagcgctgtcgtccctgcgc
catgctgcacagctgcagcagtcgtccctgcagcaggagagagagaggagcaccagggag
ctgggagaactgcagggcaggctgcaggagaagtctagccgtgaggagcagttgcagcag
aagctgctggatgagcagttctccctgctgcagggaacggtctctgaggctgagagcatc
atccaggatgctgtggccaagctggacgaccccctgcacatccgctgcaccagctcccca
gattacctggtcagtcgggcagaggccactttgggctccattgacaaagtgacaaagggt
cactcagactaccggacgaacatgagagatgctggtgggctgctgagggccctgacccag
ttctcccacctggctgctgacaccatcatcaacggcagtgccacagcacacatggctccc
actgaccacgccgaccgtctgacggagaattgcaggggctgtgccactcaaagtctgcag
ttcctgaaggatctcaagtccaaggcctctctccagagggcagatccggcctccattcgc
attgtggtccaaaagatcctgaggctgggggaggagctgcgacctaaaggcatggatgtg
cgacaggatgagctgggagatctggtggacaaggagatggcagccacatcagcagccatt
gaggaggcagtgcgcagaatcgatgaaatgatgaatcaggcacgaaaggacacctctggt
gtcaaacttgaggtcaatgaaagaatcctctacagctgcacagacctgatgaaggccatc
cacctactggtcctgacatcaaccgacttacagaaggagattgttgagggagggaggggt
gcagccactattaaggaattctacgccaggaactcccgttggactgagggactcatctct
gcctccaaagctgtgggatggggagccacacagatggttgagtccgctgataaggtggtg
ctgcacactggcaaatatgaggagctcatcgtctgctcacatgagatcgctgctagtaca
gcacagctggtcgcttcctccaaggtaaaggcagaccgcaacagtacgaaactgacagct
ctccagcaggcttctcgccgtgtgaacgagatggcagccaacgtggtggcctccaccaag
acaggccaggagcacctggaggacaaggataccatggacttctctggaatgtccctcatc
aagttaaaaatggaggaaatggagtcgcaggtgaaggtgttggagctggagaatcagctg
ggtaatgagcgtctccgtctgggagagctcaggaagaagcactatgatatagcaggtgtt
ccagcagcagacctctcagagggcaacggcctggccccctcatctgcctctgagccctcc
tcacccaaaccctccaagcctagcatcatgaggaaacctgccttggctcagaaacccaac
ttaccgcctaaaaatatgttcagatag
DBGET
integrated database retrieval system
