Coregonus clupeaformis (lake whitefish): 121530948
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Entry
121530948 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
cclu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121530948
04082 Neuroactive ligand signaling
121530948
04519 Cadherin signaling
121530948
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121530948
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121530948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121530948
NCBI-ProteinID:
XP_041692284
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MGKLRKNHFGILTFLFFFTFICCVQSAKDLRDPSNMPLVKDTVDRLMKGYDIRLRPDFGG
APVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIALNLTLDNRVADSLWV
PDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLE
IESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSIVDYKLVSKNVVFSTGSYPRLSLSFK
LKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLP
KIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKRAAEKLAVANNEKLRPDP
NKWMVGNVVQRDDALYARMKQREIDAYDTMWDPIFVDDAALGLGEQRNKITTSLTDDNIL
FGSLEMKNEMGGVPPELSRSLGAGGLGDPRNTMLAYDSSTLQYRRAAMARQNYGGGPHSA
LERHATQKKSRLRRRASQLKVNIPDLADVNSIDKWSRMIFPTVFSFFNVVYWLYYAH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggggaagctcaggaaaaaccactttggaattttgacatttttgttcttttttactttt
atctgctgtgtgcaaagcgccaaagatctgagggatcccagtaatatgccgctggttaaa
gacacggtcgacagactgatgaaaggctacgacattaggttgaggccagatttcggaggt
gcgccggtggcagtggggatgaacatagacatagccagcatagacatggtgtctgaagtc
aatatggactacacgctgaccatgtacttccagcaggcctggcgggacaagcgtctgtcc
tactctgagatagccctcaacctgacgctggataacagggtagccgactcgctctgggtt
cccgacacctacttcctcaacgataaaaagtccttcgtccacggcgtcacggtcaagaac
agaatgatccgactgcacccggacggcaccgtgctctacggactccggatcaccaccaca
gcagcctgtatgatggatctgaggcggtaccctctggatgaacagaactgcacactggag
atcgagagctatggctacaccactgatgacattgagttctactggcgagggggagatgga
gctgtgtctggggtggagagaatagagctgcctcagttctctatcgtggactacaaactg
gtctccaagaatgtggtcttctctacaggttcctacccccgcctgtctctgagcttcaag
ctgaagaggaacatcggctactttatcctccagacctacatgccctctatcctgatcacc
atcctgtcctgggtctccttctggatcaactacgatgcctccgctgccagagtggccctg
ggtatcactacggtgctgaccatgaccaccatcaacacccatctgagagagacgctgcct
aagatcccctacgtcaaggctatagacatgtacctgatgggctgctttgtattcgtcttc
ctggccctgctagagtacgccttcgtcaactacatcttctttggacgggggccccagagg
cagaagagggccgccgagaaactagccgtcgccaacaatgagaaactccgacccgacccc
aataagtggatggtgggaaatgtagttcagagagatgatgctctgtatgccagaatgaaa
cagagggaaattgacgcgtatgacacgatgtgggatcccatctttgtggacgatgccgca
ttaggactaggcgagcaaagaaataagattaccacctccctgactgatgataacatcctg
tttggttccctggagatgaagaacgagatggggggtgttcctcctgagctgtccaggtcc
ctgggcgctgggggtctgggcgacccccgcaacaccatgctggcctacgacagctccacg
ctgcagtaccgtagggccgccatggcccgccagaactacggtggaggcccccacagtgcc
ctggagcgccacgccacccagaagaagtcccgcctacggagacgggcctcgcagctcaag
gtcaacatccctgacctggctgatgtgaactccatcgacaagtggtccaggatgatcttc
cctactgtgttctccttctttaacgtggtctactggctgtactatgcacactga
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