Coregonus clupeaformis (lake whitefish): 121530960
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Entry
121530960 CDS
T08357
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121530960 (gabra6a)
04082 Neuroactive ligand signaling
121530960 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121530960 (gabra6a)
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121530960 (gabra6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121530960
NCBI-ProteinID:
XP_041692306
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All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MMGLLILILVTLTCVGSVYGQESYAGENITRILDRLLDGYDNRLRPGSGGMITEVKTDIF
VTSFGPVSDVEMEYTIDMFFRQTWVDERLKYDGAVEILRLNNKMVDKIWTPDTFFRNSRK
SIAHNMTTPNKLFRIMQNGTILYTMRLTISAECPMRLMDFPMDGHACPLRFGSYAYTSSE
ITFTWRKGLEASVDCPQESISLLQYDLVGQKLSTETFKSNTGDYSVMVVHFLLQRKLGYY
LIQTYIPLIMVVVLSQVAFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVAYATAM
DWFIAVCFAFVASALIEFAAVNYLATLQANRLKKNARQKKLEVLAEARYDDEEEDESASS
PPSERGGLKKRYNSIAQSETDTGPPLPIFLQQGSAVPPNPALAGTSPIDQYSRIMFPLAF
ALFNLFYWIIYLGKDTMEQARED
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtctcttgattctgattttggtaactttgacttgtgttggcagtgtctatgga
caagaaagctacgcaggtgaaaacatcacccgtattctggaccgactactagatggatat
gacaaccggttgcgaccaggatccggaggtatgattacagaggtgaaaacagatatcttt
gtcaccagctttggaccagtatcagatgtggaaatggagtacaccatagacatgttcttc
cgccagacctgggtggacgagaggctgaagtacgacggcgccgtggagatcctgcgtctc
aacaacaagatggtggataagatctggacgcccgacacgttcttcaggaactccaggaag
tccatcgcccacaacatgaccactcccaacaagctgttccgcatcatgcagaacgggacc
atcctctacactatgagactaaccatcagtgcagagtgtcccatgaggctcatggacttt
cctatggatggacatgcctgtcctctcaggttcggcagctatgcgtacacgagcagtgag
atcacctttacctggaggaagggcctggaagcttccgtagactgtcctcaggagtctatc
agtctgctacagtatgacctggtgggacagaagttatccacggagacattcaagtccaac
acaggtgactactctgtcatggtagtccattttctactacagaggaagctaggctactac
ctgattcagacgtacatccctctgattatggtggtggttctgtcacaagtagctttctgg
atcaacaaagagtctgtccctgcacgaactgtggctggcatcaccacggtcctcaccatg
acaaccctcagcatcagcgcccgccagtctctgcccaaggtggcctacgctacagccatg
gactggttcatcgccgtgtgtttcgccttcgtggcgtccgcgctcatcgagttcgccgcc
gtcaactacttggctacgctgcaggccaacagactgaagaagaacgccaggcagaaaaaa
ctggaggtcctggcggaagcaagatatgatgatgaggaggaggatgagagtgcttcatct
cccccgtcagagagagggggcctgaagaagaggtataactccatagcccagagtgagacg
gacactggccccccgttgcccatcttcctgcagcagggttcagctgtgccccccaaccca
gctctggctggcactagccccatagaccagtactcccgcatcatgttccccctggccttc
gcactcttcaacctgttctactggatcatatacttgggcaaggacaccatggaacaggcc
agagaggattga
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