Coregonus clupeaformis (lake whitefish): 121530963
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Entry
121530963 CDS
T08357
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K12392
AP-1 complex subunit beta-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121530963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121530963
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Others
AP-1 complex
121530963
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
PDS5
Cnd3
HEAT_GCN1
Arm
RTP1_C1
HEAT_EZ
XMAP215_CLASP_TOG
NELF-A_N
VPS15-like_hel
Arm_2
API5
FANCI_S3
Transposase_22
Motif
Other DBs
NCBI-GeneID:
121530963
NCBI-ProteinID:
XP_041692310
LinkDB
All DBs
Position
18:complement(50980899..51016130)
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AA seq
1024 aa
AA seq
DB search
MEWANQLCENRQFGSKMTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVG
KDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRA
LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDT
LKDLISDSNPMVVANAVAALSEIAESHPNSNLLDLNPQSINKLLTALNECTEWGQIFILD
CLANYTPRDDRESQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYGTLLKKL
APPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIR
LASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVN
YVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADE
LLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGY
IYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLEELICHIGTLASVYHKPPSAFVEG
SRGVMHRRLPARTGSGESTESPDVGTAAGGSAPEAAPSIIPSQGDLLGDLLNLDIAPSTT
TGPPPPTTGMQMGGMDLLGGGLDSLMGDESEPPHVPPRMDTPRSPSPQPPSPVYTHTDYT
YTDYSHTDSPPDHSPTEHSPPAELGGDIGGSPAMGAGFGVAPAVMPASLNAPVGGGLGDL
FDLGGGVGMPMGAYIPPKTVWLPAMKAKGLEISGTFARRAGVIQMELILTNKAMSVMTDF
AIQFNRNSFGLAPAGPLQVLTPLGPNQTIEVSLPLSTVGPVMKMEPLNNLQVAVKNNIDV
FYFSCQYPISMLFVEDGKMERQVFLATWKDIPNDNESQFQIKDCHLNSDAASNKLQGSNI
FTIAKRTVEGQDMLYMSIKLSNGIWVLAELRVQAGNPNYTISLKCRAPEVSQCVFQCYEA
VLKN
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggctaatcaattatgcgagaaccggcaatttggatccaagatgacggactct
aagtatttcaccactaccaagaaaggagagatctttgagctgaaagctgagctgaacagc
gataagaaggagaagaagaaggaggctgtgaagaaggtcattgcctccatgaccgttggg
aaggatgtcagtgccctgtttccagacgtggtgaactgcatgcagactgacaaccttgag
ctgaagaagctggtctacctgtacctgatgaactatgccaagagccagcccgacatggcc
atcatggctgtcaacaccttcgtcaaggactgtgaggaccctaaccccctgatccgggcc
ctggctgtgcgtactatgggctgcatccgcgtggacaagatcactgagtacctgtgtgag
cctctgaggaagtgtctgaaggacgaggacccctacgtgaggaagactgcagccgtgtgc
gtcgccaagctccatgacatcaacgcccagctggtggaggaccagggtttcctggatacc
ctcaaggacctcatctctgactccaaccccatggtggtagcgaatgccgtggcagccctg
tctgagattgcagagtcccaccccaacagcaacctgctggacctgaacccccagtccatc
aacaagctgctgacggccctcaacgagtgcaccgagtggggccagatcttcatcctggac
tgcctggccaactacacccctcgcgacgaccgcgagtcccagagtatctgtgagcgggtg
accccccgtctgtcccatgccaactctgcggtggtgctgtcagcggtcaaggtgctgatg
aagttcatggagatgcttcctaaggacctggactactatggcaccctgctgaagaagctg
gccccacccctggtcaccctgctgtctgcagagcctgagctgcagtatgtggccctgagg
aacatcaacctcatcgtgcagaaacgcccagagatcctgaagcatgagatgaaggtgttc
tttgtgaagtacaatgaccccatctatgtcaagctggagaaactggacatcatgatccgc
ctggcatctcaagccaacatcgcccaggtgctggcagagctgaaggagtatgccactgag
gtggatgtggactttgtgcggaaggcagtccgagccatcggccgctgtgccatcaaagtg
gagcaatcagctgagcgctgtgtgagcaccctgctggacctcatccagaccaaggtcaac
tatgtggtgcaggaggccatcgtggtcatcaaggacatcttccgcaagtaccccaacaag
tatgagagtgtgatcgccacgctgtgtgagaacctggactctctggacgagccggaggcg
cgggcggccatgatctggatcgtaggagagtacgctgagaggattgacaacgctgacgag
ctgctggagagcttcctggagggcttccacgacgagagcacccaggtgcagctgcagctg
ctgacagccatagtgaagctgttcctgaagaaacccactgagacccaggagctggtgcag
caggtgctcagcctggccacacaggactctgacaatccggacctgcgagaccgtggctat
atctactggcgcctgctctccactgaccctgtggctgccaaggaggtggtgctggccgag
aagcccctgatctcggaggagacagacctgattgagcccaccctgctggaggagctcatc
tgccacattggcacgctggcttccgtctaccacaaaccccccagcgccttcgtggagggc
agccgcggtgtgatgcacaggaggctccccgcccgcactgggtcaggagagagtactgag
agcccagacgtgggcactgctgctgggggctctgcccctgaggctgcaccctctatcatc
ccctcccagggggacctcctgggggacctgctcaacctggacattgcaccctccaccacc
accggccccccaccacccaccaccggcatgcagatggggggcatggacctcctgggtgga
ggtctggacagcctgatgggggatgagtctgaaccgccccatgttcccccgcggatggac
actcctcggtctccgtcacctcagcccccgtcaccagtgtacacccacactgactacacc
tacactgactacagtcacactgacagccctcctgaccacagccctactgagcacagcccc
cctgcagagcttggaggagatattggtgggagtcctgcgatgggggcaggttttggggtg
gctcctgctgtaatgccagcctcgcttaacgcccctgtggggggtggcctaggagacctg
tttgacctgggaggtggggttggcatgccgatgggagcatacattcctcccaaaacagtg
tggctcccggccatgaaggctaaaggtctggagatttctgggaccttcgctcggcgtgct
ggagtcatccagatggagctgatcctcaccaacaaggccatgagcgtcatgaccgacttc
gccatccagttcaacaggaacagttttggcctggcccctgccggccctctccaggtcctc
acccctctcggcccaaaccagaccattgaagtcagcctccccctcagcactgttgggcca
gtcatgaagatggagcctctcaacaacctgcaggtggctgtgaagaacaacattgacgtc
ttctacttcagctgccaataccccatcagcatgctgtttgtggaagatggaaagatggag
cgtcaggtgttcctggccacatggaaagacattcctaacgacaacgagtctcagttccag
atcaaagactgtcatctcaactcagatgcagccagcaacaagctgcagggcagtaacatc
ttcaccatagccaagcgcacggtggagggccaggacatgctctacatgtccatcaaactg
tccaacggcatctgggtgctggctgaactgagggtgcaggctggaaaccccaactacacg
atctctctgaagtgcagagccccagaggtgtcccagtgtgtgttccagtgctatgaggca
gtgctgaagaactga
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