Coregonus clupeaformis (lake whitefish): 121530978
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Entry
121530978 CDS
T08357
Name
(RefSeq) protein unc-13 homolog B-like
KO
K15293
protein unc-13 A/B/C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121530978
Membrane trafficking [BR:
cclu04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
121530978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
121530978
NCBI-ProteinID:
XP_045082916
LinkDB
All DBs
Position
18:35439548..35573120
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AA seq
1747 aa
AA seq
DB search
MGGPRMGGPRGPGPRMGGPRPQQRAPEPSGFGGFMSMFGAPAAPNKPAASGGFFSSPQTS
FFGSSPAPPPASGQPQQKSSFFGLPTNLPTESLTSDLFGMFNKEQEPPKPPETVPQEPTG
PSEKETVSGTGDVKDSCDPEKAALSGEADVTTEGGPTEETQRPTEEEKEALSEGEVTHEE
PGVVSREPDSSGVDKAGPPPAAEPKGMFDIPGLAPSTFGFMSGASDGASSLGSFFSSTPS
TTPATAKTPQPPQDGGLFSGFKGLSSGIFQEEKPARKEEPPSAASMFGKTLGFPWQSGPE
PPKPESPPPVVTTQPRAQGARPADADDGFSEPEADSDATEGADPSDTDEPTDTSGKTGSM
DKSPGSSETLTMQSGMPSEAVSLAMSLSEGSDKPQLYITPPEVGKDTMSEPHSSTEPNAA
NAQPIPVDSSRFGSSGNLSQASSQLSSDPEAPHPASPRPPLHSQQKASWEEEEEEEKGLK
AVPEPGSNKDLKESIITPPKPLDNRGTEKQISFFEHGPPPCSPVRIRWLKVINRVRVQLL
EGRDGDPSQHPWAKPGGATPFGIDSMPDLRKRRPIPLVSELAMSMLQARKAGLSMATKTS
LKDQELKNHVYKKTLQALIYPISCTTPHAFQVWTASTPTYCYECEGLLWGIARQGMRCAE
CGVKVHEKCQELLNADCLQRAAEKSSKTGAEDRTQHIITAMKDRMKIRERNKPEIFEEIR
AVFGVTKLLHAQQMKTIKQSVLDGTSKWSAKITITVLSAQGLQAKDRTGSSDPYVTIQVG
KTKKRTKTIYGNLNPVWEEKFNFECHNTSDRIKLRVWDEDDDIKSRVKQRLKRESDDFLG
QSIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLQISVEIEGEEKVAPYHAQYTSLHENM
FHYSTDVVGQGVVKVPVACGDDAWKVYFDEVQQDIVDEFAMRYGIESIYQAMTHFACLSS
KYMLSGIPAVMSTLLANINAFYAHPTAITNVSACDRFNASNFGKDRFVKLMDQLHNSLRI
DLSTYRNNFPASSKPRLQDLKSTVDLLTSITFFRMKVLELQSPPRAAHVVRDCVKACGNS
TYEYIFNNCIELYMRQFQPAEEPEPEETGPTIHNLDFWPKLITLIVSIIEEDKNAYTPII
NQFPQELNVGKVSAEVMWTLFAQDMKYALEEHEKHRLCKSADYMNLHFKVKWLYNEYVTD
LPAFQDTVPEYSAWFLQFVLQWLGENEDVSMEFMHGALERDKREGFQQTSEHALFSSSVV
DIFTQLNQSFEIIKKLDCPDPKVQAHYNRRFAKTITKVLMQYCAILSKEFPTYCQKEKIP
CVLMNNIQQMRVLLEKMFECMGAKQLDSEAADILNDLQVKLATVLDNLSAMFGKSFQARL
TVCMRQMAEILYQIKGHPNRQTAEADADNMLRPLMEFLDGNLSLFADTCEKTVLKRILKD
LWKIVLSSLEKTIILPPSNDGFGAQILTAAKGLSNLKGGGEAKSLTPKQCVIMDAALETI
KQYFHAGGNGLKKAYVEKSPELSSLKYALSLYSQSTDALIKTFVTTQHAQVHNGMGIRMT
PSEKVRPDRGSGVEKPVGEAQIQIDMVPPGKDKIHKVNIRVIAVNDMKWQTSGMFRPFVE
VNMIGPLLAAQKRKFTTKSKNNSWTAKYNEAFQFILGKESPDCYELQLTVKDYCFGRADR
VVGVAVIQLRDVADRKSCVCWCPLGGTIQKDETGVTVMRILSQRAADEVAKDFVKLKAET
RPVEEGR
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaccccgtatgggaggtcctagaggtccaggcccaagaatgggcggaccaaga
ccacaacagagggcccctgagccatctggatttggtggattcatgtccatgtttggtgcc
cctgctgccccaaacaaaccagcagcttccggtggctttttctcatccccacagacttca
ttctttgggtcatcacctgctcctcctcctgcttctggtcagccgcagcagaaaagctca
ttctttggtctgccaaccaacctccccactgagtccctgactagtgacctgtttggtatg
tttaataaagagcaagagccacctaaaccaccagaaacggtacctcaagaaccaacagga
ccttctgaaaaggagactgtctctgggacaggtgatgtaaaggacagttgtgaccctgaa
aaggcagctctgtcaggagaggcagatgtgacaaccgaaggagggccaactgaagagacc
cagaggcctactgaggaggagaaagaagctctttctgagggagaggtaacccatgaggag
cctggtgtcgtttctcgagagcctgattcttcaggggttgataaagctggaccccctcca
gctgcagagcctaagggcatgtttgacatccctggtctggctccatctacattcggcttc
atgtctggagcatctgatggggcttcatctctcggatctttcttctcttcaacaccttca
accacacccgctacagcgaaaacaccacagccaccacaagatggtggcctcttctctggt
tttaaaggcctctcatccggtatattccaggaagagaagccagctagaaaggaggagcct
ccttcggctgcgtccatgtttgggaagacactgggcttcccatggcagagtggccctgaa
cctcccaaaccagaatcccctcctcctgtggtcaccactcagcccagagctcagggtgct
agacctgctgatgctgacgacggtttcagcgaaccagaggcagactcggacgcgacagaa
ggcgcagatcccagtgacactgatgagccaaccgacacatccggtaaaacaggaagcatg
gacaagagcccggggagcagtgagacactgacgatgcagtccgggatgccttcggaggca
gtgtccctggcaatgtctctgtcagagggttcagataaaccccagttatatatcaccccc
cctgaggtaggcaaggacacgatgtctgaaccccactcctctacagagcccaatgcagca
aacgcacagccaatcccggtggacagcagtcgttttgggtcgtcagggaacctcagccag
gccagctcccagctcagctctgatccagaggccccccaccccgccagccctcgcccccct
ctccacagccaacagaaagcctcctgggaggaagaggaggaagaggagaaggggctgaag
gctgtcccagagccggggtccaacaaagatctgaaggagtctataatcacaccacccaaa
cccctggacaaccgtgggacagagaaacagatcagcttctttgagcatggaccacctccc
tgctctccggtcagaatacgttggctgaaggtcatcaacagagtcagagttcagctgctc
gagggccgagatggagaccccagccagcacccgtgggccaagcctggtggtgccacgccc
tttgggatcgacagcatgcctgacctccgcaagagacggcctatccccctggtcagcgag
ctggcgatgtccatgttgcaggccaggaaggctgggctctctatggctacaaagacgtcc
cttaaggaccaggagctgaagaaccacgtgtataagaagaccctgcaggctctgatctac
cctatctcctgcaccacgccccatgccttccaggtgtggaccgcctccacacccacctac
tgctacgagtgtgaggggctgctgtggggcatcgcccgccagggcatgaggtgtgctgag
tgtggggtcaaagttcacgagaagtgccaggagctgctcaacgctgactgtctacagagg
gcagctgagaagagctctaagacgggagcagaggaccggacccagcacatcatcacagct
atgaaggacaggatgaagatcagggagaggaacaagccggagatctttgaggagatcagg
gctgtgttcggtgtcactaagctgctccatgcacagcagatgaagaccatcaaacagagc
gtgttagacggaacctccaagtggtccgccaagatcaccatcactgtcctcagtgctcag
ggtctccaggctaaagacaggacaggttccagtgacccctacgtgaccatccaggtgggg
aagaccaagaagaggaccaagaccatctacggaaacctcaaccctgtctgggaggagaag
ttcaactttgagtgccacaacacgtcggaccgtatcaagctgcgtgtttgggacgaggac
gatgacatcaagtccagggtgaaacagcgtctgaagagggagtcagatgacttcctgggt
cagagcatcatcgaggtcagaacactcagcggagagatggacgtctggtacaacctggag
aagaggactgataagtcagcagtgtctggggccatcaggttacagatcagtgtggagatt
gaaggggaggagaaagtagcgccgtaccacgctcagtacaccagcctgcacgagaacatg
ttccattactctactgacgtggtgggtcagggggtagtgaaggtgcctgttgcctgtgga
gacgatgcgtggaaggtctactttgatgaggtgcagcaggatatcgtagatgaattcgcc
atgcgctacggcatcgagtccatctaccaggccatgactcactttgcctgtctgtcctct
aagtacatgttgtctggtattcctgctgtgatgagtactctgttggccaatatcaatgcc
ttctacgcccatcctacggccatcaccaacgtctccgcatgtgaccgcttcaatgcctcc
aacttcgggaaagatcgttttgttaagctcatggatcaactacacaactctcttcggatt
gacctctccacatacagaaataacttcccagccagtagtaagcctcgtctgcaggacctg
aagtctactgtggatctgctgactagcatcaccttcttcagaatgaaggtgttggaactt
cagagcccccccagggcagcccatgtggtgagagactgtgtgaaggcctgtggaaattcc
acctacgagtacatcttcaacaactgtatagagctctacatgagacagttccagcctgcc
gaagagcctgagccagaggagactgggcctactatccacaatctggacttctggcccaaa
ctcatcaccctcatcgtctccatcatagaagaagacaagaacgcctacacacccatcatt
aaccagtttcctcaggagctcaacgtggggaaggtcagtgctgaggtcatgtggacgctg
ttcgctcaggacatgaagtacgcccttgaagagcatgagaagcatcgtctgtgtaagagt
gctgattacatgaatcttcacttcaaggtcaagtggctatacaacgagtatgtgaccgac
ctgcctgctttccaagacactgtaccagagtactctgcgtggtttttgcagtttgtcctt
cagtggctgggtgagaacgaggatgtgtccatggagtttatgcatggagctctagagagg
gacaagagggaagggttccagcagacgtcggagcatgctctgttctccagttcagtagtg
gacatcttcacccagctcaaccagagctttgagatcatcaagaaactagactgtcctgac
cccaaggtgcaggcccactacaacaggcgcttcgccaagaccatcaccaaggtgctgatg
cagtactgtgctatcctgtccaaggagttccccacctactgccagaaggagaagataccc
tgtgtgttgatgaataacatacaacagatgcgggtcttgttggagaagatgtttgagtgc
atgggggctaaacagctggattcggaggcggcggacatcttgaatgacctgcaggtcaaa
ctggccaccgtcctggacaacctgagcgccatgttcggcaagagtttccaggcccgtctc
accgtctgcatgcgtcagatggcagagatcctgtaccagatcaaaggtcatcccaaccgt
caaacggccgaggccgacgctgacaacatgctaaggcctctcatggagttcctggatgga
aatctaagtctgtttgctgacacctgtgagaaaacggttctgaagagaatactgaaggat
ctgtggaagatcgtcctcagcagcttggagaagaccatcatcttaccgccgagcaacgac
ggcttcggagctcagattctgactgctgccaaggggctgtccaacctcaagggagggggc
gaggccaaaagcctgacgcccaaacagtgtgtcatcatggacgccgcactggaaaccatc
aagcaatacttccatgcgggtggtaatggtctgaagaaggcctatgtggagaagagtcct
gagttatcttcgctgaaatatgctctgtccctctactctcagagcactgatgcactaatc
aagacctttgtaacaacacagcacgcacaggtccataatgggatgggcatcaggatgact
cccagtgagaaggttcggccagacagaggttcaggagtggagaagcctgttggtgaggcc
cagatccagatagacatggtgcctccagggaaagacaagatccacaaggtcaacatcaga
gtgatagcggtgaatgacatgaagtggcagacatcagggatgttccgtcccttcgtggag
gtcaatatgattggtccactcctcgcagcccagaagaggaagttcaccaccaagtcaaag
aacaacagctggacagccaagtacaacgaggccttccaatttatcctgggtaaggagtct
ccagactgctatgagctgcagttgacggtgaaggactactgtttcggccgggccgaccgt
gttgtgggcgtggcggtgatccagctccgagacgtggctgacaggaagtcgtgcgtgtgc
tggtgcccgctgggcggaaccatccagaaggacgagacgggcgtgacggtgatgcgtatc
ttgtctcagcgtgcggccgacgaggtggccaaggactttgtcaaactgaaggccgagaca
cgccctgtagaggaggggagataa
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