Coregonus clupeaformis (lake whitefish): 121531223
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Entry
121531223 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin polyglutamylase ttll6-like
KO
K16582
tubulin polyglutamylase TTLL6/13 [EC:
6.3.2.61
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121531223
04812 Cytoskeleton proteins [BR:
cclu04812
]
121531223
Enzymes [BR:
cclu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
121531223
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
121531223
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
121531223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
121531223
NCBI-ProteinID:
XP_041692410
LinkDB
All DBs
Position
19:51279584..51283900
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AA seq
517 aa
AA seq
DB search
MDCIMDMKSYQKINHFPGMNEIYRKDLLARNMNRMLRLFLKEYNIFPKTWCLPEDYIEFQ
GYCRVWKHKTFICKPDNGCQGKGIYITRHPRDINPEENIICQNYISKITIEGVKFDLRLY
VLVTSCDPLRIFLYNKGLMRFATTKYMHPHTNNLDDVYMHLTNYAVNKHNNFDRDIETGS
KRKLSTFRSWLDQHDYDSSMVWXDVVIKTLIAAQPTLRQNYLIGFPSQLGPRSCFEILGF
DILLDAKLKPWLLQVNHSPSFATDSQLDWEVKEALLTDALTLLNLGAIDHRRILEEDKRM
TKERLLQKHQPCPKARRKQLLNSQASWMAELERYEQEHCGGFFRIYPRDDSNKYDKFLQQ
SGPLCQETLGSKARKECARKMLREMQMKEELGGRMRLPGKWWCFGEGLGRQWESPGERGS
SHRTVDKHEVGPGCQVVVWDSSRPGLIVEDDELERQRGLEQRESLLIALGGVDMVYSFLQ
PGVTRSHSVFKRVPFPHGHGGIVVLEAGTTGQRCLGM
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggactgcatcatggacatgaagagttatcagaaaattaaccacttcccagggatgaat
gagatctacaggaaggatctactggccaggaacatgaaccggatgctccgactcttcctt
aaagagtacaacatcttccccaaaacctggtgcctccctgaagactacattgaattccaa
ggttactgtcgggtgtggaagcacaagacgtttatctgcaaacctgacaatggttgccag
ggcaaagggatctacatcacccgtcatccccgggatatcaaccctgaggagaacataatt
tgccagaactacatctccaagataaccattgaaggtgttaagtttgacctccgcctgtat
gtgctggtgacatcatgtgacccactgaggatcttcttgtacaacaagggactcatgcgc
tttgccaccaccaagtacatgcatcctcacacaaacaacctggatgacgtctacatgcat
ctcaccaactatgccgtcaacaagcacaacaactttgaccgtgatatagagacaggcagt
aaaaggaagctgtcaaccttccggtcgtggctagaccagcacgattacgacagcagtatg
gtatggnaggacgtggtcattaagactctgattgctgcccagccgaccctgaggcagaac
tacctcataggcttccctagccagctggggcccagatcctgctttgagatcctgggcttt
gacatcctgctagatgccaagctcaagccctggctcctgcaggtgaaccactcccccagc
ttcgccacagactcccagctggactgggaggtgaaagaggcactgctgaccgacgctctg
accttgctaaacctgggggccatcgatcacaggaggattctggaggaggacaaacgcatg
accaaggaacgcctcctgcagaagcaccagccctgccccaaggcacggaggaagcagttg
ctcaacagccaggcatcatggatggctgagcttgagaggtatgagcaggagcactgtggt
ggcttcttcagaatctaccccagagacgactccaacaagtatgacaagttcctccagcag
tctgggccactctgccaggagaccttgggctccaaagccaggaaggagtgtgccaggaag
atgttgagggagatgcagatgaaggaggagctgggcgggcgcatgcgtttgccggggaaa
tggtggtgcttcggcgagggtttaggccggcagtgggagtcgccgggtgagagaggcagc
agccacagaacagttgacaaacatgaggtgggtcctgggtgccaggttgtggtatgggac
tcgagtcggccagggctgatcgtggaggatgatgagctggagcgtcagcggggcctggag
cagagggagagcctgctcatagccctgggaggggtggacatggtctacagcttcctgcag
cccggggtcacccgcagccacagcgtgttcaagagggtccccttcccccatggccatgga
gggatagttgtgctggaagctggcacaaccggacagcgctgcctggggatgtga
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