Coregonus clupeaformis (lake whitefish): 121531261
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Entry
121531261 CDS
T08357
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121531261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121531261
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
121531261
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
121531261
NCBI-ProteinID:
XP_041692437
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Position
19:8505073..8543707
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AA seq
729 aa
AA seq
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MMKDYNRETSSPEETIIFFRKMEASAKGRWTPDNGPSSPSSSGMQRSSCSSLKMFLAALS
FAYFSKALSGSYMKSTITQLERRFDIPSYLIGVIDGSFEIGNLLVIAFVSYFGAKLHRPK
IIAIGCVLMSFGTFLIAMPHFILGRYKFQSSIRASMNSTTNFSPCPASSTESTQAGDRAS
ILPSVGCEQESSVSMWIYVFLGNVLRGIGETPVQPLGISYIDDYARSENAALYIGCVQTI
SIIGPVFGYLLGSLCAKIYVDIGYVDMETITITPGDARWVGAWWLGYLIAGAITLMSAVP
FWFLPKSLPMPVDKHDANCTPEQTRFIKDSPSAMEHKFRPEEPANFHQMAKEFVPTLKSL
LGSPVYIIYLCVTIIQFNSLIGMVTYKPKYIEQHYGQSASKANFLMGMINIPAVALGMFS
GGVVMKKFKLGIMGAAKFAFGTSLLGYFLSLFFFAMGCDNAKVAGITMSYTGVEGLSYQE
PSLFSECNSGCLCSGRDWDPVCGENGITYVSPCLAGCTSSTGAGKNTVFGQCRCVALTGA
GSQPSNLTASLGHCPIRDSCDRMFPYFLFLSVITSFIISLGGTPGFVLLIRCIKPELKSI
ALGIHTLATRTLAGIPAPIYFGAIIDTTCLKWGNTKCGGRGACRIYNTTAYRIVYLGLTL
GLRTVSFFLCILGFALLRRHVKQEEKMSLTNGNVEMEAESLRKEEINNSTHCDQFVRALD
CNPDRETRL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagattacaacagagaaacttcttcacctgaagaaaccattatcttctttaga
aagatggaggcttcagctaaggggaggtggacaccagacaacggcccctcttccccatca
tcttcagggatgcagaggtccagttgctccagtctgaagatgttcctggcggccctgtcc
tttgcctacttctctaaggccttgtctgggagttacatgaaaagcacgataacccagctg
gagaggagatttgatatcccaagttatttgataggtgttatcgacgggagctttgaaata
ggtaacctgttggtgatagcctttgtgagttattttggtgccaagcttcaccgacccaag
atcatcgcgatcggatgtgtcctgatgtcgtttgggacgttcctcatcgccatgcctcat
tttattttaggacgctataagttccaatcgtcaattagagcatccatgaattcaactact
aacttcagtccatgtccggcaagctcaactgagtccacacaggcaggtgacagggcctct
atactgccgtctgtaggctgtgagcaagagtccagtgtgtctatgtggatctatgtgttc
ctgggtaatgtgttaagggggataggagagactcctgtacagccgctgggaatctcctat
atagacgactatgccaggtccgagaatgcagccctttacattggctgtgtccagaccata
tcaatcataggtcctgtctttggctacttactaggatccttgtgtgccaagatatacgtt
gacataggatacgtggacatggagactatcaccatcaccccaggcgatgcccgctgggtc
ggggcgtggtggctggggtacctcatagccggggctatcaccctcatgtctgccgtaccc
ttctggttcctgcccaagtcactgcccatgcctgtggataagcacgatgccaactgcacc
ccagaacagacccggttcatcaaggactctccctcagccatggaacataagtttagacca
gaggaaccggccaacttccatcaaatggctaaagaatttgttccaacattgaagagccta
ctgggaagtccagtgtatataatctacctgtgcgtgaccattattcaattcaactctctc
atcggcatggtaacctacaagcccaaatacattgagcaacattacggacagtcggcatca
aaagcaaacttcctaatgggcatgatcaacatccctgcagtggctctggggatgttctca
gggggtgtggtcatgaagaagttcaagctgggcatcatgggagctgctaagttcgcattc
gggacctccctcctgggttacttcctgtccctcttcttcttcgccatgggctgtgacaac
gccaaggtggccgggataaccatgtcatacacaggggtggaggggttgtcgtaccaggag
ccatctctgttctctgagtgtaactctggctgcctgtgctccgggagggactgggaccct
gtctgtggagagaacgggatcacgtatgtgtccccctgtttggctggctgtacatcctct
accggagctggcaaaaacacggtgtttggccagtgcaggtgtgtggcattgacaggggca
ggttctcagcccagtaacctgactgcctccctgggtcactgtccaatcagagacagctgt
gacagaatgttcccctacttcctctttctgtctgtcatcacttccttcatcatctctttg
gggggaacgccaggcttcgtacttctcatcaggtgcattaagcctgaattaaaatcaatt
gctcttggaatccacacgttggccacccggacccttgctggcatccctgcacctatctac
ttcggagccatcatagacaccacctgtttaaagtggggaaacacaaaatgcggaggaaga
ggagcgtgcagaatctacaacacgacagcctacaggatagtatacctgggtctgactctg
ggcctgaggactgtctctttcttcctgtgtatactgggcttcgctctactcaggaggcac
gtcaagcaggaagagaaaatgtcactgaccaatgggaatgtagagatggaggccgagtct
ctcaggaaagaggagatcaacaactctacacactgtgaccagtttgtaagggcgctggac
tgtaaccctgacagggagacacgcctttga
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